Pre_GI: BLASTP Hits

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Query: NC_013198:1538792:1551025 Lactobacillus rhamnosus GG, complete genome

Start: 1551025, End: 1551489, Length: 465

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015428:1544728:157480015748001575318519Lactobacillus buchneri NRRL B-30929 chromosome, complete genomephage terminase, small subunit, , P27 family6e-28122
NC_014136:329484:353391353391353957567Leuconostoc kimchii IMSNU11154 chromosome, complete genomeprophage Lp3 protein 14, terminase small subunit8e-1889.4
NC_007929:293709:308767308767309240474Lactobacillus salivarius subsp. salivarius UCC118, complete genomePhage Terminase Small Subunit3e-1787
NC_010610:535790:552537552537552998462Lactobacillus fermentum IFO 3956, complete genomephage terminase2e-1581.6
NC_015558:905227:908471908471908932462Streptococcus parauberis KCTC 11537 chromosome, complete genomehypothetical protein7e-1373.2
NC_009513:1184000:118465411846541185127474Lactobacillus reuteri F275, complete genomephage terminase, small subunit, putative, P27 family5e-1270.1
NC_008525:1013979:101588010158801016338459Pediococcus pentosaceus ATCC 25745, complete genomePhage terminase, small subunit2e-1065.1
NC_014554:1821320:182322818232281823686459Lactobacillus plantarum subsp. plantarum ST-III chromosome,P27 family phage terminase2e-1065.1
NC_002662:1418970:143921514392151439688474Lactococcus lactis subsp. lactis Il1403, complete genometerminase small subunit3e-0960.8
NC_013656:1549634:157056915705691571045477Lactococcus lactis subsp. lactis KF147, complete genomephage terminase small subunit3e-0960.8
NC_002662:447236:464045464045464497453Lactococcus lactis subsp. lactis Il1403, complete genometerminase small subunit9e-0855.8
NC_020260:1615135:163689816368981637326429Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-0755.5
NC_007434:1712000:179703817970381797523486Burkholderia pseudomallei 1710b chromosome I, complete sequencephage terminase, small subunit, putative, P27 family4e-0753.9
NC_013766:679906:694611694611695138528Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein4e-0753.5
NC_009778:1556222:157848115784811578813333Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein9e-0752.8
NC_010645:1496816:151635615163561516838483Bordetella avium 197N, complete genometerminase, small subunit2e-0651.6
NC_016612:3803130:382837238283723828806435Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative phage terminase, small subunit, P27 family protein2e-0651.2
NC_011283:3379181:340202334020233402457435Klebsiella pneumoniae 342 chromosome, complete genomephage terminase small subunit2e-0651.2