Pre_GI: BLASTP Hits

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Query: NC_013198:1095591:1128000 Lactobacillus rhamnosus GG, complete genome

Start: 1128000, End: 1129013, Length: 1014

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017297:2531750:254595625459562546921966Clostridium botulinum F str. 230613 chromosome, complete genomephage coat protein8e-27121
NC_007503:1486000:149627414962741497224951Carboxydothermus hydrogenoformans Z-2901, complete genomeprophage LambdaCh01, coat protein3e-26119
NC_012658:1810640:183391918339191834884966Clostridium botulinum Ba4 str. 657 chromosome, complete genomephage coat protein1e-25117
NC_010001:3614314:3629170362917036301771008Clostridium phytofermentans ISDg, complete genomephage coat protein1e-24114
NC_003210:2362306:2379418237941823804191002Listeria monocytogenes EGD-e, complete genomehypothetical protein3e-21102
NC_010516:2305110:232360523236052324552948Clostridium botulinum B1 str. Okra, complete genomeprophage LambdaCh01, coat protein5e-21102
NC_010520:2101515:212190421219042122875972Clostridium botulinum A3 str. Loch Maree, complete genomeprophage LambdaCh01, coat protein1e-1894
NC_014376:1472304:149759614975961498594999Clostridium saccharolyticum WM1 chromosome, complete genomephage coat protein2e-1790.1
NC_010609:880196:9002319002319013071077Lactobacillus reuteri JCM 1112, complete genomehypothetical protein2e-1273.2