Pre_GI: BLASTP Hits

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Query: NC_012917:569856:581042 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 581042, End: 581785, Length: 744

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:985617:996258996258997001744Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeputative MobC mobilization protein6e-123439
NC_012880:3529017:353497835349783535721744Dickeya dadantii Ech703, complete genomeputative MobC mobilization protein2e-119428
NC_012880:3982383:399000739900073990750744Dickeya dadantii Ech703, complete genomeputative MobC mobilization protein1e-108392
NC_012912:4012112:401962940196294020372744Dickeya zeae Ech1591, complete genomeputative MobC mobilization protein7e-106383
NC_014500:3097362:315955531595553160301747Dickeya dadantii 3937 chromosome, complete genomeMobC-like protein3e-90331
NC_016818:1795576:181583418158341816580747Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein3e-86318
NC_016818:2836851:286017228601722860921750Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein2e-85315
NC_016845:3448881:348192734819273482673747Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative MobC mobilization protein2e-83308
NC_012731:3411161:346280234628023463548747Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomemobilization protein2e-83308
NC_011751:2327014:232701423270142327766753Escherichia coli UMN026 chromosome, complete genomeputative MobC mobilization protein2e-83308
NC_011745:2209288:221251122125112213257747Escherichia coli ED1a chromosome, complete genomeputative MobC mobilization protein1e-82306
NC_016612:5296076:530039953003995301145747Klebsiella oxytoca KCTC 1686 chromosome, complete genomemobilization protein4e-82304
NC_009792:859228:870144870144870908765Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-51201
NC_020181:473170:484086484086484850765Enterobacter aerogenes EA1509E, complete genomeFIG01223304: hypothetical protein3e-51201
NC_011283:1811000:183802318380231838826804Klebsiella pneumoniae 342 chromosome, complete genomemobC protein3e-46184
NC_014500:3175283:318836831883683188754387Dickeya dadantii 3937 chromosome, complete genomeTriL protein1e-1170.5