Pre_GI: BLASTP Hits

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Query: NC_012917:2641000:2661564 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 2661564, End: 2662283, Length: 720

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:2298000:231326323132632313970708Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,murein peptide amidase A1e-94345
NC_009792:1345500:135814813581481358876729Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-93340
NC_011094:1726000:174697517469751747703729Salmonella enterica subsp. enterica serovar Schwarzengrund strmurein peptide amidase A9e-92336
NC_011080:1750000:177015617701561770884729Salmonella enterica subsp. enterica serovar Newport str. SL254,peptidase, M14C family1e-91335
NC_003197:1753663:177380017738001774528729Salmonella typhimurium LT2, complete genomeputative carboxypeptidase4e-91334
NC_016810:1709695:173065417306541731382729Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-91334
NC_016856:1763640:178377817837781784506729Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Smurein peptide amidase A4e-91334
NC_016857:1709695:173065417306541731382729Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74murein peptide amidase A4e-91334
NC_016860:1752000:177149117714911772219729Salmonella enterica subsp. enterica serovar Typhimurium strmurein peptide amidase A4e-91334
NC_016863:1711832:173197017319701732698729Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1murein peptide amidase A4e-91334
NC_017046:1709578:173053717305371731265729Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein4e-91334
NC_004631:1623511:164447816444781645206729Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein3e-91334
NC_006905:1766000:178693417869341787662729Salmonella enterica subsp. enterica serovar Choleraesuis strputative carboxypeptidase4e-90330
NC_015663:4447984:446522744652274465940714Enterobacter aerogenes KCTC 2190 chromosome, complete genomemurein peptide amidase A1e-87322
NC_021066:1778000:179181817918181792531714Raoultella ornithinolytica B6, complete genomemurein peptide amidase A1e-87322
NC_020181:969599:971164971164971877714Enterobacter aerogenes EA1509E, complete genomeGamma-D-Glutamyl-meso-Diaminopimelate Amidase1e-87322
NC_012731:2261787:226448122644812265188708Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomemurein peptide amidase A2e-87321
NC_009784:2129069:213287121328712133617747Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein5e-70264