Pre_GI: BLASTP Hits

Some Help

Query: NC_012917:1840172:1842295 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1842295, End: 1843464, Length: 1170

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:3117639:3133231313323131344001170Pectobacterium wasabiae WPP163, complete genomemajor facilitator superfamily MFS_10655
NC_012880:2778795:2801016280101628021701155Dickeya dadantii Ech703, complete genomemajor facilitator superfamily MFS_15e-86318
NC_010501:4989455:4991856499185649930281173Pseudomonas putida W619, complete genomemajor facilitator superfamily MFS_15e-67255
NC_009832:110239:1134831134831146821200Serratia proteamaculans 568, complete genomemajor facilitator superfamily MFS_11e-43177
NC_015566:69190:7280972809740081200Serratia sp. AS12 chromosome, complete genomemajor facilitator superfamily protein1e-41170
NC_015567:69190:7280972809740081200Serratia sp. AS9 chromosome, complete genomemajor facilitator superfamily protein1e-41170
NC_005773:1333863:1333863133386313350921230Pseudomonas syringae pv. phaseolicola 1448A, complete genomecyanate MFS transporter3e-27123
NC_009667:1341000:1357461135746113586901230Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencemajor facilitator transporter1e-26120
NC_016745:1719800:1734105173410517352951191Oceanimonas sp. GK1 chromosome, complete genomemajor facilitator superfamily transporter3e-26119
NC_017195:517344:5368515368515380081158Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeinner membrane transport protein YeaN2e-25117
NC_015424:2836920:2837940283794028392021263Aeromonas veronii B565 chromosome, complete genomeCyanate transport protein CynX1e-22107
NC_008314:36500:5546455464566961233Ralstonia eutropha H16 chromosome 2, complete sequenceMFS transporter1e-22107
NC_007963:3574000:3587228358722835884511224Chromohalobacter salexigens DSM 3043, complete genomemajor facilitator superfamily MFS_11e-20101
NC_008148:1567703:1584766158476615859771212Rubrobacter xylanophilus DSM 9941, complete genomemajor facilitator superfamily MFS_13e-2099.8
NC_015172:1334958:1363883136388313650851203Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomemajor facilitator superfamily MFS_12e-1893.6
NC_016582:9664000:9678407967840796797141308Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegral membrane transporter1e-1791.3
NC_011832:913994:9537649537649550381275Candidatus Methanosphaerula palustris E1-9c, complete genomemajor facilitator superfamily MFS_14e-1789.7
NC_013406:3650300:3656916365691636581541239Paenibacillus sp. Y412MC10 chromosome, complete genomecyanate transporter4e-1789.4
NC_016048:2873669:2892227289222728935341308Oscillibacter valericigenes Sjm18-20, complete genomemajor facilitator superfamily transporter2e-1687
NC_016612:5231065:5256075525607552572651191Klebsiella oxytoca KCTC 1686 chromosome, complete genometransporter, major facilitator family protein3e-1686.7
NC_008228:2295841:2310185231018523114891305Pseudoalteromonas atlantica T6c, complete genomemajor facilitator superfamily MFS_11e-1584.3
NC_013850:3303500:3304908330490833060921185Klebsiella variicola At-22 chromosome, complete genomecyanate transporter3e-1583.2
NC_014550:2562053:2565132256513225664031272Arthrobacter arilaitensis Re117, complete genomeputative MFS superfamily transporter6e-1478.6
NC_001263:243000:2617332617332628811149Deinococcus radiodurans R1 chromosome 1, complete sequenceCynX-related transport protein, putative2e-1377
NC_015635:3860570:3889579388957938908561278Microlunatus phosphovorus NM-1, complete genomeputative major facilitator superfamily transporter2e-1273.6
NC_019673:7797666:7806218780621878074711254Saccharothrix espanaensis DSM 44229 complete genomePermease, MFS-type3e-1273.2
NC_014121:2514544:2533291253329125344661176Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completecyanate transporter1e-1171.2
NC_010545:11950:3396933969353361368Corynebacterium urealyticum DSM 7109, complete genomeputative permease of the major facilitator superfamily2e-1170.5
NC_011883:487187:5074035074035085991197Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,major facilitator superfamily MFS_16e-1168.9
NC_020209:47504:9037290372916191248Pseudomonas poae RE*1-1-14, complete genometransporter, major facilitator family protein2e-1067
NC_021175:2063611:2082401208240120835731173Streptococcus oligofermentans AS 1.3089, complete genometransporter4e-0963.2
NC_015172:3095781:3100390310039031015921203Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomemajor facilitator superfamily MFS_17e-0962