Pre_GI: BLASTP Hits

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Query: NC_012917:1840172:1839633 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1839633, End: 1840184, Length: 552

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:3117639:313647831364783137017540Pectobacterium wasabiae WPP163, complete genomehypothetical protein6e-89326
NC_014965:1428902:148181414818141482353540Vibrio vulnificus MO6-24/O chromosome I, complete sequenceadenylate kinase2e-56218
NC_005139:1784000:192058119205811921120540Vibrio vulnificus YJ016 chromosome I, complete sequenceadenylate kinase4e-56216
NC_004459:2443000:251771725177172518250534Vibrio vulnificus CMCP6 chromosome I, complete sequenceAdenylate kinase1e-55215
NC_013530:1649214:167730516773051677841537Xylanimonas cellulosilytica DSM 15894, complete genomeputative adenylate kinase2e-21101
NC_013729:5982000:598351859835185983862345Kribbella flavida DSM 17836, complete genomeputative DNA topology modulation protein FlaR7e-1580.1
NC_013406:2866000:287816128781612878670510Paenibacillus sp. Y412MC10 chromosome, complete genometopology modulation protein3e-1478.2
NC_014666:3629696:363351136335113634263753Frankia sp. EuI1c chromosome, complete genomehypothetical protein3e-1374.7
NC_009332:1638763:165772516577251658231507Streptococcus pyogenes str. Manfredo chromosome, complete genometopology modulation protein7e-1373.6
NC_003485:1707653:172444117244411724947507Streptococcus pyogenes MGAS8232, complete genometopology modulation protein7e-1373.6
NC_007296:1669995:169186816918681692374507Streptococcus pyogenes MGAS6180, complete genometopology modulation protein2e-1272.4
NC_017040:1524198:154602715460271546533507Streptococcus pyogenes MGAS15252 chromosome, complete genomeDNA topology modulation protein3e-1271.6
NC_007168:454000:468842468842469324483Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein6e-1270.5
NC_007297:1639954:166152516615251662031507Streptococcus pyogenes MGAS5005, complete genometopology modulation protein9e-1269.7
NC_008022:1698431:172013217201321720638507Streptococcus pyogenes MGAS10270, complete genomeDNA topology modulation protein flar-related protein1e-1169.7
NC_008532:1769733:177537817753781775824447Streptococcus thermophilus LMD-9, complete genomeAdenylate kinase or related kinase1e-1168.9
NC_010376:1433247:145361414536141454138525Finegoldia magna ATCC 29328, complete genometopology modulation protein2e-1168.6
NC_020209:2838582:284470328447032845242540Pseudomonas poae RE*1-1-14, complete genomeDNA topology modulation kinase FlaR3e-1168.2
NC_012815:1092795:109913110991311099703573Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeputative adenylate kinase DNA topology modulator2e-1065.1
NC_012814:1092860:109919610991961099768573Bifidobacterium animalis subsp. lactis Bl-04, complete genomeputative adenylate kinase DNA topology modulator2e-1065.1
NC_011835:1819707:182604318260431826615573Bifidobacterium animalis subsp. lactis AD011 chromosome, completeadenylate kinase DNA topology modulator2e-1065.1
NC_017216:1092751:109908710990871099659573Bifidobacterium animalis subsp. lactis BLC1, complete genomeDNA topology modulation protein2e-1065.1
NC_017217:1092916:109925210992521099824573Bifidobacterium animalis subsp. lactis V9 chromosome, completeputative adenylate kinase DNA topology modulator2e-1065.1
NC_006448:1709523:171703717170371717552516Streptococcus thermophilus LMG 18311, complete genometopology modulation protein2e-1065.1
NC_006449:1714994:171766317176631718178516Streptococcus thermophilus CNRZ1066, complete genometopology modulation protein2e-1065.1
NC_017215:1091941:109889410988941099493600Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,adenylate kinase3e-1064.7
NC_017214:1727676:173401217340121734611600Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeDNA topology modulation protein flar-related protein3e-1064.7
NC_009050:427000:443458443458444018561Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceDNA topology modulation kinase FlaR, putative5e-1063.9
NC_014500:1066911:107184510718451072372528Dickeya dadantii 3937 chromosome, complete genomeDNA topology modulation protein flar-related protein6e-1063.9
NC_016109:3591401:363862836386283639137510Kitasatospora setae KM-6054, complete genomehypothetical protein8e-1063.5
NC_011134:1854868:186406718640671864582516Streptococcus equi subsp. zooepidemicus str. MGCS10565, completetopology modulation protein6e-1063.5
NC_007494:739403:755275755275755853579Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequenceDNA topology modulation kinase FlaR, putative9e-1063.2
NC_013592:956829:962315962315962842528Dickeya dadantii Ech586, complete genomehypothetical protein2e-0962.4
NC_011985:3380842:339658933965893397101513Agrobacterium radiobacter K84 chromosome 1, complete genomeDNA topology modulation kinase FlaR-like protein7e-0960.1
NC_011958:735755:749484749484750032549Rhodobacter sphaeroides KD131 chromosome 2, complete genomeIstB domain protein ATP-binding protein3e-0754.7
NC_008391:2253188:225997522599752260544570Burkholderia cepacia AMMD chromosome 2, complete sequencehypothetical protein7e-0753.5