Pre_GI: BLASTP Hits

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Query: NC_012808:1220378:1232516 Methylobacterium extorquens AM1, complete genome

Start: 1232516, End: 1232591, Length: 76

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012808:420334:43207343207343214876Methylobacterium extorquens AM1, complete genometRNA-Ala1e-0651.6
NC_010725:1419272:14302051430205143028076Methylobacterium populi BJ001, complete genometRNA-Ala1e-0651.6
NC_010172:632180:64427164427164434676Methylobacterium extorquens PA1, complete genometRNA-Ala1e-0651.6
NC_010725:594500:60609060609060616576Methylobacterium populi BJ001, complete genometRNA-Ala1e-0651.6
NC_010725:1003760:10151421015142101521776Methylobacterium populi BJ001, complete genometRNA-Ala1e-0651.6
NC_011757:577611:58970658970658978176Methylobacterium chloromethanicum CM4, complete genometRNA-Ala1e-0651.6
NC_012808:1220378:12548751254875125495076Methylobacterium extorquens AM1, complete genometRNA-Ala1e-0651.6
NC_010725:1419272:14530671453067145314276Methylobacterium populi BJ001, complete genometRNA-Ala1e-0651.6
NC_011757:748223:78163478163478170976Methylobacterium chloromethanicum CM4, complete genometRNA-Ala1e-0651.6
NC_012808:806432:81748481748481755976Methylobacterium extorquens AM1, complete genometRNA-Ala1e-0651.6
NC_011757:748223:75928875928875936376Methylobacterium chloromethanicum CM4, complete genometRNA-Ala1e-0651.6
NC_010172:1079127:10902421090242109031776Methylobacterium extorquens PA1, complete genometRNA-Ala1e-0651.6
NC_011757:1627698:16385891638589163866476Methylobacterium chloromethanicum CM4, complete genometRNA-Ala1e-0651.6
NC_012808:594000:60530760530760538276Methylobacterium extorquens AM1, complete genometRNA-Ala1e-0651.6
NC_010725:750911:76294576294576302076Methylobacterium populi BJ001, complete genometRNA-Ala1e-0651.6
NC_010172:1079127:11125831112583111265876Methylobacterium extorquens PA1, complete genometRNA-Ala1e-0651.6
NC_011757:1146608:11589931158993115906876Methylobacterium chloromethanicum CM4, complete genometRNA-Ala1e-0651.6
NC_010172:1522707:15335681533568153364376Methylobacterium extorquens PA1, complete genometRNA-Ala1e-0651.6