Pre_GI: BLASTP Hits

Some Help

Query: NC_012796:3600630:3662318 Desulfovibrio magneticus RS-1, complete genome

Start: 3662318, End: 3662641, Length: 324

Host Lineage: Desulfovibrio magneticus; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Isolated from freshwater sulfide-rich mud of a waterway near Kameno river, Wakayama, in Japan. This organism is a sulfate-reducing delta proteobacterium which synthesizes intracellular magnetite particles. Desulfovibrio magneticus produces irregular, membrane-bound magnetite particles, unlike other magnetite-producing bacteria which contain crystalline magnetite in the cytoplasm. Desulfovibrio magneticus does not migrate along a magnetic field but swims randomly.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012796:1049034:114823111482311148557327Desulfovibrio magneticus RS-1, complete genomeXre family DNA-binding protein9e-1682
NC_008609:1976403:205434520543452054668324Pelobacter propionicus DSM 2379, complete genometranscriptional regulator, XRE family4e-1167
NC_011146:3720658:374169537416953742027333Geobacter bemidjiensis Bem, complete genometranscriptional regulator, XRE family8e-1165.9
NC_002936:1395432:140162414016241401842219Dehalococcoides ethenogenes 195, complete genomeDNA-binding protein7e-1062.8
NC_020409:1173796:118106611810661181392327Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeTranscriptional regulator, XRE family8e-1062.4
NC_011979:773673:785967785967786287321Geobacter sp. FRC-32, complete genometranscriptional regulator, XRE family2e-0961.2
NC_014844:511552:515402515402515728327Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomehelix-turn-helix domain-containing protein5e-0959.7
NC_012918:928903:955145955145955465321Geobacter sp. M21 chromosome, complete genomeXRE family transcriptional regulator2e-0857.8
NC_011979:646518:664994664994665314321Geobacter sp. FRC-32, complete genometranscriptional regulator, XRE family3e-0857.4
NC_014500:894136:905690905690905920231Dickeya dadantii 3937 chromosome, complete genomeMunI regulatory protein5e-0856.2
NC_014622:5683400:568480656848065685150345Paenibacillus polymyxa SC2 chromosome, complete genometranscription factor,eukaryotic mbf17e-0855.8
NC_015573:1979202:199861019986101999377768Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein8e-0855.8
NC_014622:5683400:568439956843995684743345Paenibacillus polymyxa SC2 chromosome, complete genometranscriptional regulator1e-0755.5
NC_014500:894136:905379905379905648270Dickeya dadantii 3937 chromosome, complete genomeMunI regulatory protein2e-0754.7
NC_008358:2638245:269643226964322696641210Hyphomonas neptunium ATCC 15444, complete genomeDNA-binding protein2e-0754.7
NC_009455:273519:308492308492308707216Dehalococcoides sp. BAV1 chromosome, complete genomeXRE family transcriptional regulator2e-0754.7
NC_013890:103807:108816108816109031216Dehalococcoides sp. GT chromosome, complete genometranscriptional regulator, XRE family2e-0754.7
NC_014217:2987450:299692129969212997139219Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, XRE family3e-0753.9
NC_014500:1862000:190350619035061903814309Dickeya dadantii 3937 chromosome, complete genomeMunI regulatory protein4e-0753.5
NC_015500:1236874:124845412484541248777324Treponema brennaborense DSM 12168 chromosome, complete genomehelix-turn-helix domain protein5e-0753.1
NC_007953:938346:959539959539960510972Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, XRE family with shikimate kinase activity5e-0753.1
NC_016818:3887000:391853439185343919082549Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator6e-0752.8
NC_016641:2894899:291399229139922914339348Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator8e-0752.4
NC_014483:1146682:114946911494691149816348Paenibacillus polymyxa E681 chromosome, complete genomePutative HTH-type transcriptional regulator1e-0652
NC_009674:840000:860115860115860324210Bacillus cytotoxicus NVH 391-98 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0652
NC_007651:72952:124305124305124691387Burkholderia thailandensis E264 chromosome I, complete sequencepossible transcriptional regulator, XRE family1e-0652
NC_017098:1542284:155642015564201556767348Spirochaeta africana DSM 8902 chromosome, complete genomeputative transcriptional regulator with C-terminal CBS domains2e-0651.6
NC_020063:4653422:466162746616274662175549Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator3e-0650.8
NC_011768:3385719:341239234123923412739348Desulfatibacillum alkenivorans AK-01, complete genometranscriptional regulator, XRE family3e-0650.8
NC_016641:1530905:154211415421141542458345Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional regulator sinR3e-0650.8
NC_010067:3538169:353816935381693538783615Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0650.8
NC_009617:1487110:149075414907541491308555Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0650.8
NC_016048:2907702:293945829394582940024567Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein2e-0650.8
NC_015732:982774:9996799996791000284606Spirochaeta caldaria DSM 7334 chromosome, complete genomehelix-turn-helix domain-containing protein4e-0650.4
NC_015675:6423000:642730664273066427524219Mesorhizobium opportunistum WSM2075 chromosome, complete genomeXRE family transcriptional regulator4e-0650.4
NC_014923:5868000:587263558726355872853219Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completehelix-turn-helix domain protein4e-0650.4
NC_019973:5797000:580159558015955801813219Mesorhizobium australicum WSM2073, complete genomeputative transcriptional regulator4e-0650.4
NC_021182:554000:556374556374557291918Clostridium pasteurianum BC1, complete genomeSOS response transcriptional repressor, RecA-mediated autopeptidase3e-0650.4
NC_007275:1:186151861518971357Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completetranscriptional regulator, PbsX family5e-0649.7
NC_004632:28470:363393633936692354Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B,transcriptional regulator, PbsX family5e-0649.7
NC_014334:1848340:185643518564351856764330Lactobacillus casei str. Zhang chromosome, complete genomeputative transcriptional regulator5e-0649.7
NC_004668:2198027:221160122116012211966366Enterococcus faecalis V583, complete genometranscriptional regulator, Cro/CI family8e-0649.3
NC_012034:2555447:257925725792572579574318Anaerocellum thermophilum DSM 6725, complete genometranscriptional regulator, XRE family8e-0649.3
NC_001263:2574755:257665625766562577051396Deinococcus radiodurans R1 chromosome 1, complete sequencetranscriptional regulator, HTH_3 family7e-0649.3
NC_014323:3292082:330070433007043300994291Herbaspirillum seropedicae SmR1 chromosome, complete genomeXRE family transcription regulator protein6e-0649.3
NC_013739:717352:726063726063726323261Conexibacter woesei DSM 14684, complete genometranscriptional regulator, XRE family1e-0548.9