Pre_GI: BLASTP Hits

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Query: NC_012668:83641:93550 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 93550, End: 94716, Length: 1167

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:514742:5256315256315267971167Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein0806
NC_016445:2938887:2949778294977829509441167Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein0806
NC_002505:514732:5256235256235267891167Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein0806
NC_008554:2469156:2478594247859424798141221Syntrophobacter fumaroxidans MPOB, complete genomehypothetical protein6e-36152
NC_012483:3731542:3792876379287637941081233Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein1e-25117
NC_015136:1141925:1156413115641311575611149Burkholderia sp. CCGE1001 chromosome 1, complete sequence6e-2099
NC_010002:1879220:1946951194695119482281278Delftia acidovorans SPH-1, complete genomehypothetical protein3e-0859.7
NC_007907:5185510:520390852039085204738831Desulfitobacterium hafniense Y51, complete genomehypothetical protein7e-0858.5
NC_019896:76094:829038290383520618Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein6e-0755.5
NC_015167:1666000:1680635168063516818401206Cellulophaga lytica DSM 7489 chromosome, complete genomehypothetical protein2e-0653.9
NC_008800:1090000:1113318111331811145081191Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein6e-0652.4