Pre_GI: BLASTP Hits

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Query: NC_012668:1688500:1746049 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 1746049, End: 1747320, Length: 1272

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:1937645:1944318194431819477673450Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein0831
NC_016445:1363831:1369410136941013728593450Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein0831
NC_012578:1838470:1845143184514318485923450Vibrio cholerae M66-2 chromosome I, complete sequenceputative helicase0831
NC_012582:1976962:1982541198254119859813441Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative helicase0820
NC_009457:1444449:1451122145112214545623441Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein0820
NC_002505:1892430:190085119008511901459609Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein2e-116419
NC_002505:1892430:1898009189800919008312823Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehelicase, putative1e-110400
NC_008577:4533574:4549096454909645525423447Shewanella sp. ANA-3 chromosome 1, complete sequenceSNF2-related protein9e-102370
NC_007645:3756654:3767004376700437700153012Hahella chejuensis KCTC 2396, complete genomeSuperfamily II DNA/RNA helicase, SNF2 family3e-57222
NC_009434:1580205:1588219158821915912573039Pseudomonas stutzeri A1501, complete genomehelicase, putative4e-49196
NC_009656:6224221:6232483623248362355153033Pseudomonas aeruginosa PA7 chromosome, complete genomeSNF2 family DNA/RNA helicase3e-43176
NC_015588:939037:9360239360239390403018Isoptericola variabilis 225 chromosome, complete genomeSNF2-related protein2e-30133