Pre_GI: BLASTP Hits

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Query: NC_012660:2143376:2167344 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 2167344, End: 2167589, Length: 246

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014323:4665610:471198047119804712228249Herbaspirillum seropedicae SmR1 chromosome, complete genomebiotin carboxyl carrier protein2e-1994.7
NC_012880:2778795:279891927989192799167249Dickeya dadantii Ech703, complete genomebiotin/lipoyl attachment domain-containing protein3e-1787
NC_014541:475350:520297520297520749453Ferrimonas balearica DSM 9799 chromosome, complete genomebiotin carboxyl carrier protein6e-1166.2
NC_011312:3060371:307445030744503074905456Aliivibrio salmonicida LFI1238 chromosome chromosome 1, completeacetyl-CoA carboxylase biotin carboxyl carrier protein subunit7e-1165.9
NC_009617:1278000:128634312863431286858516Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein2e-1064.3
NC_008095:7139056:714388671438867144485600Myxococcus xanthus DK 1622, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein2e-1064.3
NC_015259:734795:761800761800762033234Polymorphum gilvum SL003B-26A1 chromosome, complete genomeAcetyl-CoA carboxylase biotin carboxyl carrier protein5e-1063.2
NC_015711:8909256:891411089141108914709600Myxococcus fulvus HW-1 chromosome, complete genomeacetyl-CoA carboxylase biotin carboxyl carrier protein8e-1062.4
NC_011753:3088952:310321831032183103670453Vibrio splendidus LGP32 chromosome 1, complete genomeputative biotin carboxyl carrier protein1e-0962
NC_016510:1874942:188209618820961882590495Flavobacterium columnare ATCC 49512 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrierprotein1e-0961.6
NC_015557:278000:290635290635291081447Hydrogenobaculum sp. 3684 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-0960.8
NC_015587:278000:290671290671291117447Hydrogenobaculum sp. SHO chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-0960.8
NC_020411:278000:290667290667291113447Hydrogenobaculum sp. HO, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-0960.8
NC_009617:3184924:320648632064863206947462Clostridium beijerinckii NCIMB 8052 chromosome, complete genomebiotin/lipoyl attachment domain-containing protein4e-0960.5
NC_010571:2041277:204956020495602050018459Opitutus terrae PB90-1, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein5e-0960.1
NC_013720:5769910:584463458446345845143510Pirellula staleyi DSM 6068, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein7e-0959.3
NC_007963:2555012:257289025728902573354465Chromohalobacter salexigens DSM 3043, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein8e-0959.3
NC_014219:2491021:249676224967622497265504Bacillus selenitireducens MLS10 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein8e-0958.9
NC_020291:1266885:129514412951441295659516Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomebiotin carboxyl carrier protein of acetyl-CoA carboxylase AccB9e-0958.9
NC_015277:6213304:918291829667486Sphingobacterium sp. 21 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein1e-0858.9
NC_007712:254000:272835272835273269435Sodalis glossinidius str. 'morsitans', complete genomebiotin carboxyl carrier protein1e-0858.5
NC_015144:1526669:153375315337531534229477Weeksella virosa DSM 16922 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein1e-0858.2
NC_010674:1170264:118044411804441180938495Clostridium botulinum B str. Eklund 17B, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein4e-0857
NC_012778:1778654:179470417947041795156453Eubacterium eligens ATCC 27750, complete genomeoxaloacetate decarboxylase5e-0856.6
NC_015499:119200:128829128829129293465Thermodesulfobium narugense DSM 14796 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein5e-0856.6
NC_004557:81362:915809158092038459Clostridium tetani E88, complete genomebiotin carboxyl carrier protein of acetyl-coA carboxylase8e-0855.8
NC_007333:1743890:174525317452531745615363Thermobifida fusca YX, complete genomehypothetical protein8e-0855.8
NC_014393:4988127:499625749962574996757501Clostridium cellulovorans 743B chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-0754.3
NC_010161:1179000:119343511934351193932498Bartonella tribocorum CIP 105476, complete genomeacetyl-CoA carboxylase biotin carboxyl carrier protein subunit3e-0753.9
NC_011979:3341099:334109933410993341566468Geobacter sp. FRC-32, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein6e-0752.8
NC_016893:135845:149419149419149883465Wigglesworthia glossinidia endosymbiont of Glossina morsitansacetyl CoA carboxylase, BCCP subunit7e-0752.8
NC_009483:2086021:211536821153682115841474Geobacter uraniireducens Rf4 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein7e-0752.8
NC_015738:629297:6453906453906472821893Eggerthella sp. YY7918, complete genomehypothetical protein8e-0752.4
NC_006677:435652:461151461151461597447Gluconobacter oxydans 621H, complete genomeBiotin carboxyl carrier protein of acetyl-CoA carboxylase1e-0652
NC_007498:2475781:247972724797272480203477Pelobacter carbinolicus DSM 2380, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein2e-0651.2
NC_015275:3299923:330784733078473308308462Clostridium lentocellum DSM 5427 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-0650.8
NC_014935:1955226:197391719739171974387471Nitratifractor saLSUginis DSM 16511 chromosome, complete genomebiotin carboxyl carrier protein4e-0650.4
NC_014910:1050706:106738310673831067856474Alicycliphilus denitrificans BC chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-0650.4
NC_010723:1133163:114434111443411144835495Clostridium botulinum E3 str. Alaska E43, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-0650.4
NC_011661:1049767:105741910574191057862444Dictyoglomus turgidum DSM 6724, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-0650.4
NC_013204:2955500:2974093297409329759821890Eggerthella lenta DSM 2243, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-0650.4
NC_011894:957897:975779975779976204426Methylobacterium nodulans ORS 2060, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein5e-0650.1
NC_013192:171000:174174174174174665492Leptotrichia buccalis DSM 1135, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein9e-0648.9