Pre_GI: BLASTP Hits

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Query: NC_012660:1804610:1820398 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 1820398, End: 1821525, Length: 1128

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008027:1559083:1576865157686515779801116Pseudomonas entomophila L48, complete genomenucleoside-diphosphate-sugar epimerase WbjC3e-152538
NC_014640:6745873:6764312676431267654181107Achromobacter xylosoxidans A8 chromosome, complete genomeNAD dependent epimerase/dehydratase family protein 62e-150532
NC_016745:2785346:2792885279288527940031119Oceanimonas sp. GK1 chromosome, complete genomeNAD-dependent epimerase/dehydratase5e-150530
NC_010322:1520973:1536073153607315371911119Pseudomonas putida GB-1 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-148525
NC_015379:1887275:1908865190886519099831119Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,NAD dependent epimerase/dehydratase3e-147521
NC_006513:3486558:3502800350280035039271128Azoarcus sp. EbN1, complete genomeprobable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis1e-142506
NC_009656:1994392:2021096202109620222171122Pseudomonas aeruginosa PA7 chromosome, complete genomeprotein WbjC4e-142504
NC_008782:3167440:3195058319505831962091152Acidovorax sp. JS42, complete genomeNAD-dependent epimerase/dehydratase5e-136484
NC_005363:1604337:1630440163044016315401101Bdellovibrio bacteriovorus HD100, complete genomecapsular polysaccharide synthesis enzyme Cap5F9e-129460
NC_011663:1709003:1728016172801617291191104Shewanella baltica OS223 chromosome, complete genomeNAD-dependent epimerase/dehydratase4e-125447
NC_015424:3112637:3129941312994131310621122Aeromonas veronii B565 chromosome, complete genomeNAD dependent epimerase/dehydratase1e-123443
NC_014313:165490:1792761792761803611086Hyphomicrobium denitrificans ATCC 51888 chromosome, completeNAD-dependent epimerase/dehydratase5e-123441
NC_013282:2827757:2838121283812128392241104Cronobacter turicensis, complete genomehypothetical protein5e-117421
NC_013361:2848949:2857935285793528590411107Escherichia coli O26:H11 str. 11368 chromosome, complete genomeUDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase4e-115414
NC_009483:1936486:1964174196417419653641191Geobacter uraniireducens Rf4 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-101370
NC_009253:3272000:3291453329145332925621110Desulfotomaculum reducens MI-1 chromosome, complete genomeNAD-dependent epimerase/dehydratase3e-101368
NC_014220:170021:1767801767801778951116Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-100366
NC_021171:4519495:4523662452366245247711110Bacillus sp. 1NLA3E, complete genomecapsular polysaccharide synthesis protein Cap5F4e-98358
NC_017095:119361:1193611193611204701110Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeWxcM-like protein,NAD dependent epimerase/dehydratase family protein2e-97355
NC_015152:272500:2839582839582850671110Spirochaeta sp. Buddy chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-96352
NC_009614:947775:9695659695659707191155Bacteroides vulgatus ATCC 8482 chromosome, complete genomeepimerase/dehydratase, involved in capsular polysaccharide biosynthesis2e-93342
NC_011060:514874:5462265462265473441119Pelodictyon phaeoclathratiforme BU-1, complete genomeNAD-dependent epimerase/dehydratase1e-89330
NC_015732:529201:5693055693055704171113Spirochaeta caldaria DSM 7334 chromosome, complete genomeNAD-dependent epimerase/dehydratase7e-86317
NC_009615:4642500:4667846466784646690541209Parabacteroides distasonis ATCC 8503 chromosome, complete genomecapsular polysaccharide biosynthesis protein Cps4K4e-80298
NC_013410:3280039:3332277333227733334821206Fibrobacter succinogenes subsp. succinogenes S85 chromosome,NAD-dependent epimerase/dehydratase7e-80297
NC_014033:103020:1257981257981269941197Prevotella ruminicola 23 chromosome, complete genomehypothetical protein2e-76286
NC_014958:3131191:3139989313998931410981110Deinococcus maricopensis DSM 21211 chromosome, complete genomeNAD-dependent epimerase/dehydratase5e-51201
NC_014151:813755:8292318292318303251095Cellulomonas flavigena DSM 20109 chromosome, complete genomeNAD-dependent epimerase/dehydratase5e-46185
NC_015145:2693749:2715978271597827170691092Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme1e-44181
NC_010168:1373337:1379004137900413801131110Renibacterium salmoninarum ATCC 33209 chromosome, complete genomecapsular polysaccharide synthesis enzyme4e-42172
NC_013929:2375613:2454632245463224556541023Streptomyces scabiei 87.22 chromosome, complete genomecarbohydrate epimerase1e-0964.7
NC_008740:2905990:293933629393362940283948Marinobacter aquaeolei VT8, complete genomeNAD-dependent epimerase/dehydratase3e-0963.2
NC_014394:3036758:304178930417893042733945Gallionella capsiferriformans ES-2 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-0860.8
NC_016604:1285277:129154612915461292517972Mycobacterium rhodesiae NBB3 chromosome, complete genomenucleoside-diphosphate-sugar epimerase1e-0860.8
NC_011832:2527183:254524125452412545717477Candidatus Methanosphaerula palustris E1-9c, complete genomedTDP-4-dehydrorhamnose 3,5 epimerase3e-0860.1
NC_009464:2523092:254917725491772549650474Uncultured methanogenic archaeon RC-I, complete genomedTDP-4-dehydrorhamnose 3,5 epimerase4e-0859.3
NC_014820:1057826:105874610587461059645900Cenarchaeum symbiosum A, complete genomenucleoside-diphosphate-sugar epimerase4e-0859.3
NC_009659:2523874:252642925264292527367939Janthinobacterium sp. Marseille chromosome, complete genomenucleoside-diphosphate-sugar epimerase1e-0758.2
NC_009077:1027357:104027310402731041247975Mycobacterium sp. JLS, complete genomeNAD-dependent epimerase/dehydratase2e-0757.4
NC_008700:2701500:271288427128842713807924Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein3e-0756.6
NC_010717:4626178:4640350464035046414261077Xanthomonas oryzae pv. oryzae PXO99A, complete genomesugar nucleotide epimerase/dehydratase4e-0756.2
NC_007705:755948:7627887627887638641077Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomeputative sugar nucleotide epimerase/dehydratase4e-0756.2
NC_011000:3409126:341204434120443413021978Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative nucleotide sugar epimerase/dehydratase4e-0756.2
NC_009138:1138917:116755111675511168489939Herminiimonas arsenicoxydans, complete genomeUDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase)5e-0755.8
NC_014306:4106569:413152641315264132440915Erwinia billingiae Eb661, complete genomeNAD dependent epimerase/dehydratase6e-0755.5
NC_014539:860402:882602882602883573972Burkholderia sp. CCGE1003 chromosome 1, complete sequenceNAD-dependent epimerase/dehydratase9e-0755.1
NC_009051:165102:167803167803168279477Methanoculleus marisnigri JR1, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase9e-0755.1
NC_016642:2440070:245290724529072453884978Pseudovibrio sp. FO-BEG1 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-0654.7
NC_012912:3853377:385640038564003857374975Dickeya zeae Ech1591, complete genomeNAD-dependent epimerase/dehydratase2e-0653.5
NC_015320:470988:475353475353475850498Archaeoglobus veneficus SNP6 chromosome, complete genomeCupin 2 barrel domain-containing protein6e-0652.4
NC_015578:247266:270687270687271607921Treponema primitia ZAS-2 chromosome, complete genomeNAD-dependent epimerase/dehydratase6e-0652.4