Pre_GI: BLASTP Hits

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Query: NC_012560:3771861:3773630 Azotobacter vinelandii DJ, complete genome

Start: 3773630, End: 3774028, Length: 399

Host Lineage: Azotobacter vinelandii; Azotobacter; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism was first isolated from the soil in Vineland, New Jersey, although it is found worldwide. It is a large obligate aerobe that has one of the highest respiratory rates of any organism. Azotobacter vinelandii also produces a number of unusual nitrogenases which allow it to fix atmospheric nitrogen to ammonia, a compound it can then use as a nitrogen source. It protects the oxygen-sensitive nitrogenase enzymes through its high respiratory rate, which sequesters the nitrogenase complexes in an anoxic environment. This organism has a number of unusual characteristics. Under extreme environmental conditions, the cell will produce a cyst that is resistant to dessication and is surrounded by two capsular polysaccharide layers. This organism produces two industrially important polysaccharides, poly-beta-hydroxybutyrate (PHB) and alginate. PHB is a thermoplastic biopolymer, and alginate is used in the food industry. Alginate is also used by the pathogen Pseudomonas aeruginosa to infect the lungs of cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021150:3771860:377362937736293774027399Azotobacter vinelandii CA6, complete genomesingle-stranded DNA binding protein1e-70264
NC_008781:3508784:352827035282703528686417Polaromonas naphthalenivorans CJ2, complete genomehypothetical protein1e-2098.6
NC_011601:1039500:104908910490891049457369Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomesingle-stranded DNA binding protein2e-0651.2
NC_013008:3231414:324110532411053241473369Escherichia coli O157:H7 str. TW14359 chromosome, complete genomesingle-stranded DNA binding protein3e-0650.8
NC_011353:3276734:328623432862343286602369Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein3e-0650.8
NC_008563:1175035:118405211840521184420369Escherichia coli APEC O1, complete genomeputative single-stranded DNA binding protein of prophage5e-0650.1
NC_004431:1401681:140880914088091409177369Escherichia coli CFT073, complete genomePutative single-stranded DNA binding protein of prophage5e-0650.1
NC_011751:1405381:141618714161871416555369Escherichia coli UMN026 chromosome, complete genomeputative single-stranded DNA binding protein of prophage5e-0650.1
NC_007946:1239278:124666412466641247032369Escherichia coli UTI89, complete genomebacteriophage lambda putative single-stranded DNA binding protein5e-0650.1
NC_011742:1177946:118764011876401188008369Escherichia coli S88 chromosome, complete genomessDNA-binding protein5e-0650.1
NC_012759:4132527:413913741391374139505369Escherichia coli BW2952 chromosome, complete genomeLambda prophage-derived protein ea105e-0650.1
NC_012947:3015985:302336030233603023728369Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein5e-0650.1
NC_002655:1332961:133884513388451339213369Escherichia coli O157:H7 EDL933, complete genomeputative single-stranded DNA binding protein4e-0650.1
NC_013361:3112023:313221031322103132578369Escherichia coli O26:H11 str. 11368 chromosome, complete genomesingle stranded DNA-binding protein5e-0649.7
NC_013941:3300000:330501633050163305384369Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeLambda prophage-derived protein ea105e-0649.7
NC_013941:975353:986461986461986829369Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeLambda prophage-derived protein ea106e-0649.7
NC_011601:717072:727705727705728073369Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomesingle-stranded DNA-binding protein6e-0649.7
NC_009800:289000:299543299543299911369Escherichia coli HS, complete genomehypothetical protein6e-0649.3