Pre_GI: BLASTP Hits

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Query: NC_012560:1965251:1968383 Azotobacter vinelandii DJ, complete genome

Start: 1968383, End: 1969171, Length: 789

Host Lineage: Azotobacter vinelandii; Azotobacter; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism was first isolated from the soil in Vineland, New Jersey, although it is found worldwide. It is a large obligate aerobe that has one of the highest respiratory rates of any organism. Azotobacter vinelandii also produces a number of unusual nitrogenases which allow it to fix atmospheric nitrogen to ammonia, a compound it can then use as a nitrogen source. It protects the oxygen-sensitive nitrogenase enzymes through its high respiratory rate, which sequesters the nitrogenase complexes in an anoxic environment. This organism has a number of unusual characteristics. Under extreme environmental conditions, the cell will produce a cyst that is resistant to dessication and is surrounded by two capsular polysaccharide layers. This organism produces two industrially important polysaccharides, poly-beta-hydroxybutyrate (PHB) and alginate. PHB is a thermoplastic biopolymer, and alginate is used in the food industry. Alginate is also used by the pathogen Pseudomonas aeruginosa to infect the lungs of cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021150:1965264:196839619683961969184789Azotobacter vinelandii CA6, complete genomehydroxypyruvate isomerase protein4e-141500
NC_009439:3535152:353437035343703535161792Pseudomonas mendocina ymp, complete genomehydroxypyruvate isomerase4e-96350
NC_010498:4967724:497439449743944975176783Escherichia coli SMS-3-5, complete genomehydroxypyruvate isomerase Gcxl9e-50197
NC_006513:2708213:272860627286062729448843Azoarcus sp. EbN1, complete genomeputative hydroxypyruvate isomerase protein1e-49196
NC_011894:3161289:318899731889973189788792Methylobacterium nodulans ORS 2060, complete genomehydroxypyruvate isomerase1e-47189
NC_020453:3103549:310536931053693106160792Agromonas oligotrophica S58 DNA, complete genomehydroxypyruvate isomerase7e-47187
NC_009664:63230:790917909179912822Kineococcus radiotolerans SRS30216, complete genomeHydroxypyruvate isomerase4e-45181
NC_013850:2846069:284669428466942847476783Klebsiella variicola At-22 chromosome, complete genomeHydroxypyruvate isomerase7e-45180
NC_015733:3736104:378104337810433781798756Pseudomonas putida S16 chromosome, complete genomehydroxypyruvate isomerase8e-44177
NC_008570:1143578:114280811428081143581774Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeAP endonuclease, family 21e-42173
NC_003197:3005842:305803230580323058808777Salmonella typhimurium LT2, complete genomeputative endonuclease2e-42172
NC_016856:3026426:307826930782693079045777Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-42172
NC_016860:3029272:308146230814623082238777Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-42172
NC_016863:2974333:302652130265213027297777Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-42172
NC_017046:3027161:307934830793483080124777Salmonella enterica subsp. enterica serovar Typhimurium str. 798hydroxypyruvate isomerase2e-42172
NC_016831:2867766:292005529200552920831777Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative hydroxypyruvate isomerase3e-42171
NC_009801:3013838:304011830401183040894777Escherichia coli E24377A, complete genomeAP endonuclease, family 24e-42171
NC_016857:3028421:308060830806083081369762Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74YgbM protein9e-41167
NC_016810:3028421:308060830806083081369762Salmonella enterica subsp. enterica serovar Typhimurium strputative hydroxypyruvate isomerase9e-41167
NC_011283:2836000:285675928567592857541783Klebsiella pneumoniae 342 chromosome, complete genomeAP endonuclease, family 21e-40166
NC_011283:2836000:283983128398312840613783Klebsiella pneumoniae 342 chromosome, complete genomeAP endonuclease, family 21e-40166
NC_016513:317197:324142324142324918777Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completehydroxypyruvate isomerase5e-39161
NC_013416:16493:218242182422600777Aggregatibacter actinomycetemcomitans D11S-1, complete genomehydroxypyruvate isomerase6e-39160
NC_010676:2658495:267663426766342677422789Burkholderia phytofirmans PsJN chromosome 2, complete sequenceHydroxypyruvate isomerase7e-39160
NC_008782:1863853:188682918868291887656828Acidovorax sp. JS42, complete genomeHydroxypyruvate isomerase1e-38159
NC_015381:1623587:167294016729401673710771Burkholderia gladioli BSR3 chromosome 1, complete sequencehydroxypyruvate isomerase2e-34146
NC_013729:4978401:498338749833874984196810Kribbella flavida DSM 17836, complete genomeHydroxypyruvate isomerase9e-25114
NC_018531:3983925:399947439994744000277804Arthrobacter sp. Rue61a chromosome, complete genomehydroxypyruvate isomerase3e-21102
NC_018531:1900619:193793319379331938709777Arthrobacter sp. Rue61a chromosome, complete genomexylose isomerase domain-containing protein2e-1789.4
NC_014364:2751662:276072227607222761519798Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeXylose isomerase domain protein TIM barrel9e-1580.9
NC_012032:448161:464835464835465605771Chloroflexus sp. Y-400-fl, complete genomeXylose isomerase domain protein TIM barrel3e-1375.9
NC_010175:448020:464693464693465463771Chloroflexus aurantiacus J-10-fl, complete genomeXylose isomerase domain protein TIM barrel3e-1375.9
NC_014041:4517999:452638645263864527327942Zunongwangia profunda SM-A87 chromosome, complete genomeprobable glyoxylate-induced protein4e-1375.5
NC_015914:4489601:450363545036354504549915Cyclobacterium marinum DSM 745 chromosome, complete genomexylose isomerase domain-containing protein1e-1170.9
NC_009832:2596344:261601126160112616790780Serratia proteamaculans 568, complete genomeXylose isomerase domain protein TIM barrel1e-1067.4
NC_014364:773500:773883773883774707825Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeXylose isomerase domain protein TIM barrel3e-1065.9
NC_014963:5034904:505526250552625056122861Terriglobus saanensis SP1PR4 chromosome, complete genomexylose isomerase domain-containing protein5e-0961.6
NC_016590:1380092:139937013993701400245876Burkholderia sp. YI23 chromosome 3, complete sequencexylose isomerase domain-containing protein9e-0960.8
NC_015379:2751342:275501627550162755807792Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative isomerase8e-0960.8
NC_013850:3340882:335603633560363356815780Klebsiella variicola At-22 chromosome, complete genomeXylose isomerase domain protein TIM barrel7e-0857.8
NC_014364:3707311:372507537250753725887813Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeXylose isomerase domain protein TIM barrel2e-0756.6
NC_015703:754172:775723775723776574852Runella slithyformis DSM 19594 chromosome, complete genomeXylose isomerase domain-containing protein TIM barrel5e-0755.1
NC_013757:2858327:287227328722732873049777Geodermatophilus obscurus DSM 43160, complete genomeXylose isomerase domain protein TIM barrel1e-0653.5