Pre_GI: BLASTP Hits

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Query: NC_012560:1564500:1567059 Azotobacter vinelandii DJ, complete genome

Start: 1567059, End: 1567520, Length: 462

Host Lineage: Azotobacter vinelandii; Azotobacter; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism was first isolated from the soil in Vineland, New Jersey, although it is found worldwide. It is a large obligate aerobe that has one of the highest respiratory rates of any organism. Azotobacter vinelandii also produces a number of unusual nitrogenases which allow it to fix atmospheric nitrogen to ammonia, a compound it can then use as a nitrogen source. It protects the oxygen-sensitive nitrogenase enzymes through its high respiratory rate, which sequesters the nitrogenase complexes in an anoxic environment. This organism has a number of unusual characteristics. Under extreme environmental conditions, the cell will produce a cyst that is resistant to dessication and is surrounded by two capsular polysaccharide layers. This organism produces two industrially important polysaccharides, poly-beta-hydroxybutyrate (PHB) and alginate. PHB is a thermoplastic biopolymer, and alginate is used in the food industry. Alginate is also used by the pathogen Pseudomonas aeruginosa to infect the lungs of cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021150:1564229:156707215670721567533462Azotobacter vinelandii CA6, complete genometranscriptional activator RfaH6e-73272
NC_004129:5846415:585309858530985853817720Pseudomonas fluorescens Pf-5, complete genometranscriptional activator RfaH3e-31134
NC_018691:1822731:182592618259261826393468Alcanivorax dieselolei B5 chromosome, complete genometranscriptional activator RfaH5e-28123
NC_012559:2663747:270735427073542707872519Laribacter hongkongensis HLHK9, complete genomeRfaH2e-25114
NC_014532:1481787:148850814885081489050543Halomonas elongata DSM 2581, complete genomeK05785 transcriptional antiterminator RfaH5e-21100
NC_019902:27574:458834588346371489Thioalkalivibrio nitratireducens DSM 14787, complete genomeTranscriptional activator RfaH4e-1993.6
NC_005773:1135374:116149511614951162073579Pseudomonas syringae pv. phaseolicola 1448A, complete genometranscriptional activator RfaH2e-1891.7
NC_007954:3171081:320585032058503206350501Shewanella denitrificans OS217, complete genometranscriptional activator RfaH4e-1786.7
NC_008700:2701500:273069327306932731196504Shewanella amazonensis SB2B, complete genometranscriptional activator rfaH, putative9e-1682.4
NC_017506:2504746:253812125381212538501381Marinobacter adhaerens HP15 chromosome, complete genometranscriptional activator RfaH1e-1581.6
NC_011566:1597751:159965015996501600174525Shewanella piezotolerans WP3, complete genomeTranscriptional activator RfaH2e-1271.2
NC_009092:1599526:160845316084531608980528Shewanella loihica PV-4, complete genomeNusG antitermination factor3e-1270.9
NC_008577:1579950:158776915877691588269501Shewanella sp. ANA-3 chromosome 1, complete sequenceNusG antitermination factor5e-1270.1
NC_008322:1595500:159756415975641598064501Shewanella sp. MR-7, complete genomeNusG antitermination factor6e-1269.7
NC_011663:1709003:171310317131031713609507Shewanella baltica OS223 chromosome, complete genometranscriptional acivator RfaH5e-1166.6
NC_009665:3460906:348608834860883486594507Shewanella baltica OS185 chromosome, complete genometranscriptional acivator RfaH5e-1166.6
NC_009052:3381943:340800234080023408508507Shewanella baltica OS155, complete genomeNusG antitermination factor1e-1065.5
NC_016026:997225:100262410026241003127504Micavibrio aeruginosavorus ARL-13 chromosome, complete genometranscription termination factor nusG family protein6e-1063.2
NC_010424:1778459:179698617969861797507522Candidatus Desulforudis audaxviator MP104C, complete genomeNusG antitermination factor2e-0961.2
NC_014305:126029:140112140112140666555Erwinia billingiae Eb661 plasmid pEB170, complete sequenceTranscriptional activator9e-0959.3
NC_008781:3365468:339717433971743397728555Polaromonas naphthalenivorans CJ2, complete genomeNusG antitermination factor6e-0856.6
NC_010674:222016:233657233657234178522Clostridium botulinum B str. Eklund 17B, complete genometranscription termination/antitermination factor NusG1e-0652.4
NC_008262:2598920:263435626343562634877522Clostridium perfringens SM101, complete genometranscription termination/antitermination factor NusG1e-0652.4
NC_010723:223935:235588235588236109522Clostridium botulinum E3 str. Alaska E43, complete genometranscription termination/antitermination factor NusG2e-0651.6
NC_009662:222964:250162250162250692531Nitratiruptor sp. SB155-2, complete genometranscription antitermination protein NusG3e-0651.2
NC_013525:1953920:196299819629981963603606Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeNusG antitermination factor5e-0650.1