Pre_GI: BLASTP Hits

Some Help

Query: NC_012125:4716000:4745021 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 4745021, End: 4745695, Length: 675

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:4638707:466770646677064668380675Salmonella enterica subsp. enterica serovar Choleraesuis strputative dienelactone hydrolase2e-109394
NC_011205:4718239:474491547449154745589675Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853dienelactone hydrolase3e-108390
NC_004631:4687270:470697547069754707640666Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein8e-107386
NC_011147:4460726:449655644965564497221666Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-105382
NC_011294:4560902:458760845876084588273666Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-104378
NC_011274:4538722:456540145654014566066666Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-104378
NC_010102:4745949:476556847655684766095528Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-89326
NC_015761:4355335:437335143733514374007657Salmonella bongori NCTC 12419, complete genomehypothetical protein1e-82305
NC_016048:4163225:418218741821874182792606Oscillibacter valericigenes Sjm18-20, complete genomeputative hydrolase3e-35148
NC_016048:456732:467126467126467698573Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein4e-27121
NC_009848:354202:380004380004380588585Bacillus pumilus SAFR-032, complete genomedienelactone hydrolase7e-27120
NC_016894:1092005:110896411089641109572609Acetobacterium woodii DSM 1030 chromosome, complete genomedienelactone hydrolase8e-22103
NC_017271:3057161:308042430804243081086663Xanthomonas campestris pv. raphani 756C chromosome, completecarboxymethylenebutenolidase2e-0962.8
NC_016591:202342:209305209305209997693Burkholderia sp. YI23 plasmid byi_2p, complete sequenceCarboxymethylenebutenolidase5e-0651.2