Pre_GI: BLASTP Hits

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Query: NC_012125:1360593:1369496 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1369496, End: 1369744, Length: 249

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:397138:404744404744404992249Salmonella enterica subsp. enterica serovar Typhimurium strregulatory protein1e-40164
NC_011205:645591:653125653125653376252Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853Mnt1e-27121
NC_013364:2612822:262232526223252622576252Escherichia coli O111:H- str. 11128, complete genomeputative transcriptional repressor3e-24110
NC_007946:2593500:260463426046342604882249Escherichia coli UTI89, complete genomeregulatory protein2e-22103
NC_011283:4170369:419074941907494191000252Klebsiella pneumoniae 342 chromosome, complete genomeregulatory protein Mnt3e-21100
NC_020418:3102460:311219731121973112451255Morganella morganii subsp. morganii KT, complete genomehypothetical protein3e-1993.6
CP002185:2608000:262317526231752623435261Escherichia coli W, complete genomehypothetical protein3e-1580.5
CP002516:1475521:148242214824221482682261Escherichia coli KO11, complete genomeputative transcriptional repressor protein3e-1580.5
NC_016902:1475521:148242214824221482682261Escherichia coli KO11FL chromosome, complete genomeputative transcriptional repressor protein3e-1580.5
NC_011748:2655989:267090826709082671246339Escherichia coli 55989, complete genomeputative regulatory protein mnt (modular protein)3e-1580.1
CU928145:2655989:267090826709082671246339Escherichia coli 55989 chromosome, complete genomeputative regulatory protein mnt (modular protein)3e-1580.1
NC_013361:3254000:326922532692253269491267Escherichia coli O26:H11 str. 11368 chromosome, complete genometranscriptional repressor protein4e-1579.7
NC_017328:335160:342100342100342393294Shigella flexneri 2002017 chromosome, complete genomeputative Chromosome segregation ATPase6e-1579.7
NC_011083:403022:410576410576410749174Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,Mnt8e-0752.4
NC_010322:3831444:383806338380633838221159Pseudomonas putida GB-1 chromosome, complete genomeArc domain-containing protein1e-0652