Pre_GI: BLASTP Hits

Some Help

Query: NC_012125:1360593:1367046 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1367046, End: 1369043, Length: 1998

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017328:335160:3400133400133420101998Shigella flexneri 2002017 chromosome, complete genomeGene 13 protein01131
NC_016902:1475521:1480335148033514823321998Escherichia coli KO11FL chromosome, complete genomehypothetical protein01127
CP002185:2608000:2623525262352526255221998Escherichia coli W, complete genomehypothetical protein01127
CP002516:1475521:1480335148033514823321998Escherichia coli KO11, complete genomehypothetical protein01127
NC_010067:2529750:2564616256461625666131998Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein01118
NC_011083:403022:4076004076004095971998Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein01117
NC_016860:397138:4023154023154042911977Salmonella enterica subsp. enterica serovar Typhimurium strDNA transfer protein0982
NC_015566:4350080:4365697436569743699474251Serratia sp. AS12 chromosome, complete genomehypothetical protein1e-126454
NC_006905:401154:4057234057234076361914Salmonella enterica subsp. enterica serovar Choleraesuis strTPA: injection protein2e-84313
NC_011205:645591:6501766501766520891914Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853injection protein8e-83308
NC_013361:3254000:3270062327006232719061845Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA injection protein1e-56221
NC_009800:320115:3236143236143254401827Escherichia coli HS, complete genomeputative injection protein3e-56220
NC_013364:2612822:2623543262354326253811839Escherichia coli O111:H- str. 11128, complete genomeputative DNA injection protein7e-56219
NC_011740:2072173:2084927208492720867711845Escherichia fergusonii ATCC 35469, complete genomeDNA transfer protein from phage3e-55217
NC_011742:2489000:2502643250264325046582016Escherichia coli S88 chromosome, complete genomeDNA transfer protein from bacteriophage1e-48195
NC_008563:2565876:2579546257954625815612016Escherichia coli APEC O1, complete genomehypothetical protein1e-48195
NC_020418:3102460:3113815311381531160012187Morganella morganii subsp. morganii KT, complete genomehypothetical protein5e-1996.7
NC_007946:2593500:2606275260627526084342160Escherichia coli UTI89, complete genomeDNA transfer protein3e-1790.5
NC_011146:3991683:3999466399946640019102445Geobacter bemidjiensis Bem, complete genomehypothetical protein7e-1066.2