Pre_GI: BLASTP Hits

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Query: NC_012108:2542328:2556971 Desulfobacterium autotrophicum HRM2, complete genome

Start: 2556971, End: 2557495, Length: 525

Host Lineage: Desulfobacterium autotrophicum; Desulfobacterium; Desulfobacteraceae; Desulfobacterales; Proteobacteria; Bacteria

General Information: It was isolated from a marine sediment in the Mediterranean sea near Venice, Italy. It is involved in the anaerobic mineralization of organic matter coming from the water column. Desulfobacterium autotrophicum is capable of growing litho-autotrophically with H2, CO2 and sulfate, but also by coupling sulfate reduction with the oxidation of fatty acids. This organism can transform tetra to dichlormethane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004347:718091:748237748237748848612Shewanella oneidensis MR-1, complete genomecold shock domain family protein1e-34145
NC_004459:2443000:257510025751002575567468Vibrio vulnificus CMCP6 chromosome I, complete sequenceCold shock domain family protein4e-33140
NC_006138:225832:252701252701253288588Desulfotalea psychrophila LSv54, complete genomehypothetical protein2e-32138
NC_004603:1897532:190226619022661902760495Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein6e-32136
NC_009092:521519:542808542808543425618Shewanella loihica PV-4, complete genomecold-shock DNA-binding domain protein7e-29126
NC_007948:3541987:355141135514113551992582Polaromonas sp. JS666, complete genomecold-shock DNA-binding domain protein2e-28124
NC_006513:1695487:170804017080401708609570Azoarcus sp. EbN1, complete genomeprobable cold shock family protein1e-27122
NC_010506:5195000:520433252043325204952621Shewanella woodyi ATCC 51908, complete genomecold-shock DNA-binding domain protein6e-25113
NC_008751:1043269:108077710807771081310534Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeputative cold-shock DNA-binding domain protein1e-21102
NC_002937:1915787:192581719258171926353537Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completecold shock domain protein3e-1787.8
NC_013173:2884887:289990228999022900072171Desulfomicrobium baculatum DSM 4028, complete genome1e-1479.3
NC_009439:1174432:117984611798461180316471Pseudomonas mendocina ymp, complete genomehypothetical protein5e-1477
NC_013194:4034854:403871240387124039014303Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completecold-shock DNA-binding protein family3e-1374.7
NC_017075:2293209:230344023034402303844405Rubrivivax gelatinosus IL144, complete genomehypothetical protein3e-1271.2
NC_016147:151224:167376167376167663288Pseudoxanthomonas spadix BD-a59 chromosome, complete genomecold-shock DNA-binding protein family4e-1167.4
NC_009085:893601:909395909395909742348Acinetobacter baumannii ATCC 17978, complete genomeExcalibur2e-1065.1
NC_011595:3015895:302083630208363021183348Acinetobacter baumannii AB307-0294, complete genomehypothetical protein2e-1065.1
NC_012559:854507:866611866611866865255Laribacter hongkongensis HLHK9, complete genomeProphage MuMc02, nuclease, putative5e-0857
NC_015856:1733500:175381917538191754436618Collimonas fungivorans Ter331 chromosome, complete genomecold-shock DNA-binding domain-containing protein1e-0756.2
NC_007963:1582089:159483515948351594975141Chromohalobacter salexigens DSM 3043, complete genome3e-0651.2