Pre_GI: BLASTP Hits

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Query: NC_011989:2549252:2565675 Agrobacterium vitis S4 chromosome 1, complete sequence

Start: 2565675, End: 2567717, Length: 2043

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012559:2563922:2575213257521325777322520Laribacter hongkongensis HLHK9, complete genomeTPR repeat protein6e-77289
NC_012791:2423466:2429404242940424316262223Variovorax paradoxus S110 chromosome 1, complete genomeTPR repeat-containing protein5e-72272
NC_008820:1766973:1787759178775917889461188Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein5e-65249
NC_002939:2844240:2867897286789728696541758Geobacter sulfurreducens PCA, complete genomeTPR domain/SEC-C motif domain protein1e-54214
NC_010162:9641549:9649807964980796518672061Sorangium cellulosum 'So ce 56', complete genomeTPR domain-containing protein4e-52206
NC_008576:2011959:2028673202867320315792907Magnetococcus sp. MC-1, complete genomeTetratricopeptide TPR_2 repeat protein3e-49196
NC_002977:1600350:1607847160784716099462100Methylococcus capsulatus str. Bath, complete genomeTPR domain protein9e-47188
NC_010814:2217153:2227048222704822321925145Geobacter lovleyi SZ, complete genomeTPR repeat-containing protein2e-44181
NC_019902:97987:1077261077261099452220Thioalkalivibrio nitratireducens DSM 14787, complete genomeTPR domain protein, putative component of TonB system2e-42174
NC_013851:2211120:2226033222603322279311899Allochromatium vinosum DSM 180 chromosome, complete genomeTPR repeat-containing protein2e-42174
NC_013851:2211120:2227959222795922299592001Allochromatium vinosum DSM 180 chromosome, complete genomeTetratricopeptide TPR_2 repeat protein3e-42173
NC_007963:2232000:2239021223902122432684248Chromohalobacter salexigens DSM 3043, complete genomesulfotransferase2e-41171
NC_010002:960027:9682399682399701821944Delftia acidovorans SPH-1, complete genomeTPR repeat-containing protein3e-39163
NC_017068:2569609:2582126258212625838141689Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein1e-38161
NC_013592:1730505:1738842173884217422943453Dickeya dadantii Ech586, complete genomeMethyltransferase regulatory domain, predicted6e-38159
NC_017068:2569609:2578412257841225811712760Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein1e-37158
NC_003272:637970:6548436548436570622220Nostoc sp. PCC 7120, complete genomehypothetical protein3e-37157
NC_007651:3656433:3656433365643336587782346Burkholderia thailandensis E264 chromosome I, complete sequenceTPR domain protein2e-36154
NC_012917:2921932:2936082293608229395133432Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeMethyltransferase type 113e-36154
NC_014117:3375796:3377641337764133825454905Burkholderia sp. CCGE1002 chromosome chromosome 1, completeTetratricopeptide TPR_2 repeat protein9e-36152
NC_004547:1970686:1976824197682419802433420Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-35151
NC_010725:4035397:4100670410067041028412172Methylobacterium populi BJ001, complete genomeTetratricopeptide TPR_2 repeat protein4e-35150
NC_012912:1788308:1797617179761718010513435Dickeya zeae Ech1591, complete genomeMethyltransferase type 126e-35149
NC_017277:1283477:1292215129221512943682154Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-34147
NC_017052:1283720:1292458129245812946112154Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein2e-34147
NC_017039:1283732:1292470129247012946232154Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein2e-34147
NC_000911:1284552:1293398129339812955512154Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-34147
NC_011884:732000:7479207479207501392220Cyanothece sp. PCC 7425, complete genomeTPR repeat-containing protein3e-34147
NC_009484:98250:1119441119441141452202Acidiphilium cryptum JF-5 chromosome, complete genomehypothetical protein4e-34146
NC_015186:132567:1445611445611467622202Acidiphilium multivorum AIU301, complete genomehypothetical protein1e-33145
NC_016514:2950860:2965370296537029687503381Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein2e-33144
NC_007413:2961611:2974646297464629768682223Anabaena variabilis ATCC 29413, complete genomehypothetical protein3e-33143
NC_007513:75197:1170371170371192112175Synechococcus sp. CC9902, complete genomeTPR repeat6e-33142
NC_006576:1551939:1566358156635815682771920Synechococcus elongatus PCC 6301, complete genomeSPY protein2e-32141
NC_007604:41495:5260652606545071902Synechococcus elongatus PCC 7942, complete genomeTPR repeat2e-32141
NC_010002:661696:6686236686236702841662Delftia acidovorans SPH-1, complete genomeTetratricopeptide domain protein6e-32139
NC_014121:1357339:1377923137792313812583336Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative SAM-dependent methyltransferases/Predicted O-linked N-acetylglucosamine transferase5e-32139
NC_011884:732000:7456957456957479112217Cyanothece sp. PCC 7425, complete genomeTPR repeat-containing protein3e-31137
NC_007775:1002934:1020398102039810242493852Synechococcus sp. JA-3-3Ab, complete genomemethyltransferase, FkbM family2e-28128
NC_008340:774206:7786307786307813952766Alkalilimnicola ehrlichei MLHE-1, complete genomemethyltransferase FkbM family3e-27124
NC_010002:661696:6786256786256815492925Delftia acidovorans SPH-1, complete genomeTetratricopeptide TPR_2 repeat protein1e-26122
NC_004113:1026886:1034604103460410379843381Thermosynechococcus elongatus BP-1, complete genomehypothetical protein1e-26122
NC_015563:606783:6147786147786175792802Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein1e-25118
NC_007776:474361:4856834856834893183636Synechococcus sp. JA-2-3B'a(2-13), complete genomemethyltransferase, FkbM family1e-22108
NC_007513:75197:1149021149021170822181Synechococcus sp. CC9902, complete genomeO-linked N-acetylglucosamine transferase SPINDLY family-like8e-22105
NC_007643:2722265:2722265272226527277785514Rhodospirillum rubrum ATCC 11170, complete genomeGlycosyl transferase4e-20100
NC_007413:2961611:2965749296574929687723024Anabaena variabilis ATCC 29413, complete genomeGlycosyl transferase, family 21e-1482
NC_010571:5127812:5134282513428251367172436Opitutus terrae PB90-1, complete genomeTetratricopeptide TPR_2 repeat protein1e-1482
NC_003272:637970:6503286503286533693042Nostoc sp. PCC 7120, complete genomehypothetical protein2e-1275.1
NC_007776:474361:4743614743614763341974Synechococcus sp. JA-2-3B'a(2-13), complete genomeTPR domain protein2e-1068.2
NC_005071:1903581:1913984191398419164732490Prochlorococcus marinus str. MIT 9313, complete genomeTPR repeat:HAT (Half-A-TPR) repeat1e-0862.4
NC_011386:1727203:173371517337151734023309Oligotropha carboxidovorans OM5, complete genomeUDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase2e-0861.6
NC_008820:1659612:1678311167831116811212811Prochlorococcus marinus str. MIT 9303, complete genomehypothetical protein2e-0861.2
NC_005071:1903581:1911797191179719138722076Prochlorococcus marinus str. MIT 9313, complete genomeTPR repeat4e-0860.5
NC_005071:288922:3177203177203200442325Prochlorococcus marinus str. MIT 9313, complete genomeSAM (and some other nucleotide) binding motif:TPR repeat2e-0758.5
NC_014733:1073540:1094406109440610961061701Methylovorus sp. MP688 chromosome, complete genometetratricopeptide tpr_2 repeat protein3e-0757.8
NC_008312:2264832:2264832226483222700455214Trichodesmium erythraeum IMS101, complete genomeglycosyl transferase, family 24e-0653.9