Pre_GI: BLASTP Hits

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Query: NC_011988:924721:927881 Agrobacterium vitis S4 chromosome 2, complete genome

Start: 927881, End: 928873, Length: 993

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003295:112778:1292151292151303541140Ralstonia solanacearum GMI1000, complete genomePUTATIVE D-AMINO ACID OXIDASE FLAVOPROTEIN OXIDOREDUCTASE2e-41169
NC_002677:363432:3816553816553826771023Mycobacterium leprae TN, complete genomeputative oxidoreductase7e-26118
NC_011896:363448:3816713816713826931023Mycobacterium leprae Br4923, complete genomeputative oxidoreductase7e-26118
NC_013715:1907503:1912622191262219137041083Rothia mucilaginosa DY-18, complete genomeglycine/D-amino acid oxidase1e-20100
NC_000918:465627:4835834835834846441062Aquifex aeolicus VF5, complete genomehypothetical protein8e-1478.2
NC_014831:2201246:2223388222338822245871200Thermaerobacter marianensis DSM 12885 chromosome, complete genomeglycine oxidase ThiO4e-1272.4
NC_017030:4588167:4606880460688046079951116Corallococcus coralloides DSM 2259 chromosome, complete genomeglycine oxidase ThiO6e-1272
NC_014394:2228470:2232697223269722337611065Gallionella capsiferriformans ES-2 chromosome, complete genomeglycine oxidase ThiO2e-1170.1
NC_005945:754517:7561427561427572511110Bacillus anthracis str. Sterne, complete genomeglycine oxidase2e-1170.1
NC_007516:2277910:2302913230291323039801068Synechococcus sp. CC9605, complete genomeputative thiamine biosynthesis oxidoreductase1e-1067.4
NC_015556:4118304:4123843412384341249161074Pseudomonas fulva 12-X chromosome, complete genomeglycine oxidase ThiO2e-0963.2
NC_009482:2051890:2068353206835320694951143Synechococcus sp. RCC307 chromosome, complete genomeglycine/D-amino acid oxidase family protein3e-0859.7
NC_019896:2805098:2830603283060328317121110Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeGlycine oxidase4e-0755.8
NC_018080:5192264:5197779519777951988551077Pseudomonas aeruginosa DK2 chromosome, complete genomeD-amino acid oxidase2e-0653.9
NC_005125:2269343:2288011228801122890661056Gloeobacter violaceus PCC 7421, complete genomeprobable oxidoreductase8e-0651.6