Pre_GI: BLASTP Hits

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Query: NC_011982:206784:219847 Agrobacterium vitis S4 plasmid pTiS4, complete sequence

Start: 219847, End: 220458, Length: 612

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016812:3641786:3657825365782536593211497Sinorhizobium fredii HH103, complete genometransposase1e-47189
NC_016812:3641786:3644590364459036460831494Sinorhizobium fredii HH103, complete genometransposase2e-47188
NC_015259:734795:7538427538427553381497Polymorphum gilvum SL003B-26A1 chromosome, complete genomeIS20 family transposase IstA-like protein2e-45181
NC_015259:673662:6804266804266820751650Polymorphum gilvum SL003B-26A1 chromosome, complete genomeIS20 family transposase IstA-like protein5e-45180
NC_007964:3036771:306006730600673060483417Nitrobacter hamburgensis X14, complete genometransposase3e-36151
NC_015186:36502:4929749297507961500Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element4e-21101
NC_012988:4292815:4330840433084043323391500Methylobacterium extorquens DM4, complete genometransposase of ISMdi7, IS21 family (ORF 1)1e-1996.3
NC_020911:3046916:3050114305011430511241011Octadecabacter antarcticus 307, complete genome3e-1788.2
NC_020911:2921925:2927000292700029284991500Octadecabacter antarcticus 307, complete genomeIS21-family transposase4e-1787.8
NC_020911:1776670:1790817179081717923161500Octadecabacter antarcticus 307, complete genomeIS21-family transposase4e-1787.8
NC_020911:3475096:3495003349500334965021500Octadecabacter antarcticus 307, complete genomeIS21-family transposase4e-1787.8
NC_020911:83717:9814398143996421500Octadecabacter antarcticus 307, complete genomeIS21-family transposase4e-1787.8
NC_019892:2684793:2703985270398527054781494Singulisphaera acidiphila DSM 18658 chromosome, complete genometransposase4e-1374.7
NC_015520:2612767:2627649262764926291451497Mahella australiensis 50-1 BON chromosome, complete genomeSigma-70 region 4 type 22e-0858.9
NC_017219:2292040:231431223143122315238927Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative truncated transposase1e-0756.6
NC_014377:669216:674348674348675172825Thermosediminibacter oceani DSM 16646 chromosome, complete genomeIntegrase catalytic region1e-0756.6
NC_013740:1943740:1960419196041919618491431Acidaminococcus fermentans DSM 20731, complete genomeIntegrase catalytic region2e-0755.5
NC_013235:2257899:2291364229136422929681605Nakamurella multipartita DSM 44233, complete genomeIstA22e-0755.5
NC_014638:56500:6925269252707121461Bifidobacterium bifidum PRL2010 chromosome, complete genomeIS21 family transposase2e-0755.5
NC_017218:178564:2013042013042026231320Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome5e-0754.7
NC_014158:233733:2355142355142372111698Tsukamurella paurometabola DSM 20162 chromosome, complete genometransposase5e-0754.3
NC_015859:1589707:1594025159402515955181494Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element7e-0753.9
NC_015859:1536439:1549430154943015508691440Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element7e-0753.9
NC_011830:4722607:4727077472707747284051329Desulfitobacterium hafniense DCB-2, complete genometransposase7e-0753.9
NC_017218:534699:5403275403275418081482Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome8e-0753.9
NC_017218:1655009:1655009165500916564901482Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome8e-0753.9
NC_014650:1410790:141499314149931415553561Geobacillus sp. Y4.1MC1 chromosome, complete genometransposase1e-0653.5
NC_010816:1989868:1991274199127419927551482Bifidobacterium longum DJO10A, complete genomeTransposase1e-0653.1
NC_014550:3316115:333048033304803331055576Arthrobacter arilaitensis Re117, complete genome2e-0652.4
NC_014377:1943476:1972807197280719743301524Thermosediminibacter oceani DSM 16646 chromosome, complete genomeIntegrase catalytic region2e-0652
NC_014377:961259:9757109757109772331524Thermosediminibacter oceani DSM 16646 chromosome, complete genomeIntegrase catalytic region2e-0652
NC_014377:1227850:1261882126188212634051524Thermosediminibacter oceani DSM 16646 chromosome, complete genomeIntegrase catalytic region2e-0652
NC_014377:480158:4811154811154826381524Thermosediminibacter oceani DSM 16646 chromosome, complete genomeIntegrase catalytic region2e-0652
NC_013929:5850599:5857445585744558590911647Streptomyces scabiei 87.22 chromosome, complete genometransposase3e-0651.6
NC_014169:1099024:1111964111196411134421479Bifidobacterium longum subsp. longum JDM301 chromosome, completetransposase8e-0650.4