Pre_GI: BLASTP Hits

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Query: NC_011982:206784:212205 Agrobacterium vitis S4 plasmid pTiS4, complete sequence

Start: 212205, End: 212795, Length: 591

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006933:1051873:1057800105780010589591160Brucella abortus biovar 1 str. 9-941 chromosome II, completeIS3 family element, transposase orfA2e-25115
NC_015858:1150446:115624111562411156645405Brucella pinnipedialis B2/94 chromosome chromosome 2, completeIS1953 family transposase OrfA6e-21100
NC_007624:1046500:105255510525551052836282Brucella melitensis biovar Abortus 2308 chromosome II, completeHelix-turn-helix, Fis-type:Transposase, IS3/IS911family5e-21100
NC_013118:1109610:111564811156481115929282Brucella microti CCM 4915 chromosome 2, complete genomeIS1953 family transposase orfA5e-21100
NC_004311:1096649:110268711026871102968282Brucella suis 1330 chromosome II, complete sequenceIS3 family element, transposase orfA5e-21100
NC_003318:183914:196441196441196722282Brucella melitensis 16M chromosome II, complete sequenceTRANSPOSASE5e-21100
NC_020911:3159290:316812931681293168404276Octadecabacter antarcticus 307, complete genomeIS3-family transposase3e-1891.3
NC_020911:2998000:304094130409413041216276Octadecabacter antarcticus 307, complete genomeIS3-family transposase3e-1891.3
NC_010510:534024:549024549024549320297Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completetransposase IS3/IS911 family protein3e-1788.2
NC_020908:1920169:192474419247441925019276Octadecabacter arcticus 238, complete genomeIS3 family element orfA3e-1788.2
NC_015730:3693391:371729837172983717573276Roseobacter litoralis Och 149 chromosome, complete genomeputative transposase3e-1581.6
NC_015730:3662934:367073536707353671010276Roseobacter litoralis Och 149 chromosome, complete genometransposase3e-1581.6
NC_020911:1776670:178385617838561784131276Octadecabacter antarcticus 307, complete genomeIS3-family transposase1e-1479.3
NC_020911:3076791:309385430938543094147294Octadecabacter antarcticus 307, complete genomeputative IS3/IS911-family element transposase1e-1066.6
NC_012526:300126:314273314273314572300Deinococcus deserti VCD115, complete genomeputative transposase8e-1063.5
NC_014814:2588628:259656825965682596858291Mycobacterium sp. Spyr1 chromosome, complete genomeTransposase1e-0963.2
NC_014215:2295500:229997622999762300281306Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Transposase IS3/IS9117e-0857
NC_015656:1947810:194992419499241950214291Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS3/IS911 family protein9e-0856.6
NC_015656:1653450:166211616621161662406291Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS3/IS911 family protein9e-0856.6
NC_015656:1469501:147925514792551479545291Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS3/IS911 family protein9e-0856.6
NC_015656:381554:400047400047400337291Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS3/IS911 family protein9e-0856.6
NC_015656:3653440:365931436593143659604291Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS3/IS911 family protein9e-0856.6
NC_015656:1592021:160167916016791601969291Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS3/IS911 family protein9e-0856.6
NC_015656:1618329:162455316245531624843291Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS3/IS911 family protein9e-0856.6
NC_015656:2795784:280961428096142809904291Frankia symbiont of Datisca glomerata chromosome, complete genometransposase IS3/IS911 family protein9e-0856.6
NC_006932:531000:550426550426550643218Brucella abortus biovar 1 str. 9-941 chromosome I, complete2e-0755.8
NC_015857:531314:551006551006551323318Brucella pinnipedialis B2/94 chromosome chromosome 1, completetransposase IS3/IS911 family protein3e-0755.5
NC_017248:529500:548858548858549175318Brucella melitensis NI chromosome chromosome I, complete sequencetransposase IS3/IS911 family protein3e-0755.5
NC_009921:8549757:859519085951908595486297Frankia sp. EAN1pec, complete genometransposase IS3/IS911 family protein2e-0755.5
NC_013757:729986:744553744553745102550Geodermatophilus obscurus DSM 43160, complete genome2e-0755.5
NC_007974:138176:159585159585159884300Ralstonia metallidurans CH34 chromosome 2, complete sequencetransposase IS3/IS9113e-0755.1
NC_007974:1135863:114414111441411144437297Ralstonia metallidurans CH34 chromosome 2, complete sequencetransposase IS3/IS9113e-0755.1
NC_007974:2048000:205470120547012054997297Ralstonia metallidurans CH34 chromosome 2, complete sequencetransposase IS3/IS9113e-0755.1
NC_008148:2231045:223702022370202237343324Rubrobacter xylanophilus DSM 9941, complete genometransposase IS3/IS9113e-0755.1
NC_007951:769500:782522782522782818297Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase6e-0753.9
NC_007951:2206263:221900022190002219296297Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase, ISRSO8 orfA like6e-0753.9
NC_010717:4787750:480579148057914806084294Xanthomonas oryzae pv. oryzae PXO99A, complete genometransposase IS31e-0653.1
NC_015222:2475792:249060824906082490907300Nitrosomonas sp. AL212 chromosome, complete genometransposase IS3/IS911 family protein2e-0652.4
NC_011894:3161289:320063332006333200848216Methylobacterium nodulans ORS 2060, complete genomehypothetical protein3e-0652
NC_020302:85821:900789007890404327Corynebacterium halotolerans YIM 70093 = DSM 44683, completetransposase3e-0651.6
NC_015314:89815:932519325193541291Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, completetransposase IS3/IS911 family protein4e-0651.2
NC_017986:2985514:299765529976552997948294Pseudomonas putida ND6 chromosome, complete genomeTransposase IS36e-0650.4
NC_009921:5331565:533503953350395335329291Frankia sp. EAN1pec, complete genometransposase IS3/IS911 family protein8e-0650.1
NC_009921:3255833:326025332602533260543291Frankia sp. EAN1pec, complete genometransposase IS3/IS911 family protein8e-0650.1
NC_009921:1668306:167649116764911676781291Frankia sp. EAN1pec, complete genometransposase IS3/IS911 family protein8e-0650.1
NC_009921:3255833:326325032632503263540291Frankia sp. EAN1pec, complete genometransposase IS3/IS911 family protein8e-0650.1
NC_020126:8512908:851875585187558519093339Myxococcus stipitatus DSM 14675, complete genomeIS3 family transposase OrfA1e-0550.1