Pre_GI: BLASTP Hits

Some Help

Query: NC_011961:891815:905627 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 905627, End: 906742, Length: 1116

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015500:1236874:1244664124466412457521089Treponema brennaborense DSM 12168 chromosome, complete genomeMicrosomal epoxide hydrolase2e-59229
NC_014834:959986:9724489724489735691122Rhodopseudomonas palustris DX-1 chromosome, complete genomeepoxide hydrolase domain-containing protein2e-59229
NC_013406:3926531:3933507393350739346671161Paenibacillus sp. Y412MC10 chromosome, complete genomeEpoxide hydrolase domain-containing protein1e-58226
NC_009077:2308634:2325926232592623270681143Mycobacterium sp. JLS, complete genomeEpoxide hydrolase domain protein6e-57221
NC_008726:549102:5619515619515630931143Mycobacterium vanbaalenii PYR-1, complete genomeEpoxide hydrolase domain protein6e-57221
NC_009077:1725683:1737095173709517382371143Mycobacterium sp. JLS, complete genomeEpoxide hydrolase domain protein6e-57221
NC_008705:1790222:1801634180163418027761143Mycobacterium sp. KMS, complete genomeEpoxide hydrolase domain protein6e-57221
NC_008146:1748026:1798610179861017997431134Mycobacterium sp. MCS, complete genomeEpoxide hydrolase-like protein5e-57221
NC_009338:555587:5895775895775907101134Mycobacterium gilvum PYR-GCK chromosome, complete genomeepocide hydrolase domain-containing protein5e-57221
NC_009338:630130:6656626656626667951134Mycobacterium gilvum PYR-GCK chromosome, complete genomeepocide hydrolase domain-containing protein5e-57221
NC_014814:169374:1801211801211812631143Mycobacterium sp. Spyr1 chromosome, complete genomehydrolase or acyltransferase of alpha/beta superfamily6e-57221
NC_009380:3043140:3053122305312230542791158Salinispora tropica CNB-440 chromosome, complete genomeepocide hydrolase domain-containing protein1e-56220
NC_018524:444217:4459284459284471061179Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeepoxide hydrolase family protein2e-56219
NC_016604:3184855:3185396318539631865381143Mycobacterium rhodesiae NBB3 chromosome, complete genomealpha/beta hydrolase1e-54213
NC_014815:2055286:2074948207494820760661119Micromonospora sp. L5 chromosome, complete genomemicrosomal epoxide hydrolase7e-54211
NC_008278:613329:6142406142406153281089Frankia alni ACN14a, complete genomeEpoxide hydrolase8e-54211
NC_007951:1711223:1726082172608217272571176Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative epoxide hydrolase1e-51203
NC_015434:5434500:5445350544535054465101161Verrucosispora maris AB-18-032 chromosome, complete genomeputative epoxide hydrolase5e-51202
NC_008313:1956500:1957749195774919591191371Ralstonia eutropha H16 chromosome 1, complete sequenceepoxide hydrolase3e-51202
NC_008543:323773:3407433407433420201278Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceEpoxide hydrolase domain protein9e-51201
NC_013729:4978401:4987161498716149883001140Kribbella flavida DSM 17836, complete genomeEpoxide hydrolase domain protein1e-50200
NC_015690:1348691:1365074136507413662401167Paenibacillus mucilaginosus KNP414 chromosome, complete genomeputative hydrolase or acyltransferase of alpha/beta superfamily4e-50199
NC_011001:568970:5853495853495866261278Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative hydrolase2e-50199
NC_015675:4526500:4529980452998045312781299Mesorhizobium opportunistum WSM2075 chromosome, complete genomeEpoxide hydrolase domain-containing protein2e-50199
NC_016935:1868839:1888759188875918899251167Paenibacillus mucilaginosus 3016 chromosome, complete genomealpha/beta hydrolase4e-50198
NC_015675:4526500:4552548455254845538401293Mesorhizobium opportunistum WSM2075 chromosome, complete genomeEpoxide hydrolase domain-containing protein4e-49195
NC_007492:6372900:6389822638982263911381317Pseudomonas fluorescens PfO-1, complete genomeEpoxide hydrolase-like9e-49194
NC_013947:5075581:5080684508068450818111128Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeEpoxide hydrolase domain-containing protein4e-46185
NC_014659:2737843:2754030275403027552561227Rhodococcus equi 103S, complete genomeepoxide hydrolase4e-44179
NC_009953:4942500:4946974494697449481161143Salinispora arenicola CNS-205 chromosome, complete genomeepocide hydrolase domain-containing protein2e-44179
NC_016113:11500:1551715517166351119Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceEpoxide hydrolase domain-containing protein8e-42171
NC_008268:7576365:7583065758306575842371173Rhodococcus sp. RHA1, complete genomepossible epoxide hydrolase1e-41171
NC_015125:788931:794851794851795801951Microbacterium testaceum StLB037, complete genomepredicted hydrolase or acyltransferase2e-38160
NC_008278:2813362:2840115284011528413501236Frankia alni ACN14a, complete genomePutative epoxide hydrolase3e-1789.7
NC_015656:632960:650636650636650914279Frankia symbiont of Datisca glomerata chromosome, complete genome6e-0755.5
NC_007510:943068:957211957211958065855Burkholderia sp. 383 chromosome 1, complete sequenceAlpha/beta hydrolase7e-0755.1
NC_016631:1329702:134463413446341345515882Granulicella mallensis MP5ACTX8 chromosome, complete genomealpha/beta hydrolase fold protein1e-0654.7
NC_014100:449541:471519471519472493975Caulobacter segnis ATCC 21756 chromosome, complete genomealpha/beta hydrolase fold protein1e-0654.3
NC_015563:3203012:325350232535023254398897Delftia sp. Cs1-4 chromosome, complete genomealpha/beta hydrolase fold protein2e-0653.5
NC_010628:2418000:242718024271802428049870Nostoc punctiforme PCC 73102, complete genomealpha/beta hydrolase fold protein3e-0653.1
NC_014100:449541:473818473818474690873Caulobacter segnis ATCC 21756 chromosome, complete genomealpha/beta hydrolase fold protein4e-0652.8
NC_014838:589581:607861607861608766906Pantoea sp. At-9b plasmid pPAT9B01, complete sequencealpha/beta hydrolase fold protein6e-0652
NC_011000:1216430:123825112382511239141891Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative hydrolase8e-0652