Pre_GI: BLASTP Hits

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Query: NC_011959:972798:976651 Thermomicrobium roseum DSM 5159, complete genome

Start: 976651, End: 979422, Length: 2772

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013161:1023716:1029046102904610307161671Cyanothece sp. PCC 8802, complete genomeprotein of unknown function DUF4707e-66253
NC_011726:1023690:1029020102902010306901671Cyanothece sp. PCC 8801, complete genomeprotein of unknown function DUF4707e-66253
NC_015425:718384:7386537386537412622610Clostridium botulinum BKT015925 chromosome, complete genomeLysyl transferase2e-50201
NC_015516:1222632:1226859122685912292852427Melissococcus plutonius ATCC 35311, complete genomehypothetical protein7e-47189
NC_014633:837588:8375888375888401282541Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencehypothetical protein5e-38160
NC_014364:1263427:1268217126821712707932577Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeprotein of unknown function DUF4703e-37157
NC_004578:4499143:4499143449914345017852643Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-33144
NC_009806:35990:4104641046420861041Kineococcus radiotolerans SRS30216 plasmid pKRAD01, completehypothetical protein2e-28128
NC_014718:791528:8102868102868130362751Burkholderia rhizoxinica HKI 454 chromosome, complete genomeOXACILLIN RESISTANCE-ASSOCIATED PROTEIN FMTC3e-27124
NC_006087:1483761:1503539150353915059292391Leifsonia xyli subsp. xyli str. CTCB07, complete genomelysyl-tRNA synthetase2e-25118
NC_021182:4310900:4327777432777743294471671Clostridium pasteurianum BC1, complete genomehypothetical protein3e-24114
NC_018720:1510084:1510084151008415126932610Bifidobacterium asteroides PRL2011 chromosome, complete genomehypothetical protein2e-23111
NC_014656:1536540:1551871155187115544442574Bifidobacterium longum subsp. longum BBMN68 chromosome, completehypothetical protein5e-1997.4
NC_016887:55000:7624676246794493204Nocardia cyriacigeorgica GUH-2, complete genomelysyl-tRNA synthetase2e-1688.6
NC_017301:1037519:1059801105980110624972697Corynebacterium pseudotuberculosis C231 chromosome, completehypothetical protein9e-1686.7
NC_017303:1039562:1060002106000210626982697Corynebacterium pseudotuberculosis I19 chromosome, complete genomehypothetical protein9e-1686.7
NC_017305:1037133:1057573105757310602692697Corynebacterium pseudotuberculosis PAT10 chromosome, completehypothetical protein9e-1686.7
NC_016781:1039716:1060156106015610628522697Corynebacterium pseudotuberculosis 3/99-5 chromosome, completehypothetical protein8e-1686.7
NC_017300:1045555:1057638105763810603342697Corynebacterium pseudotuberculosis 1002 chromosome, completehypothetical protein8e-1686.7
NC_014329:1041556:1060165106016510628612697Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein8e-1686.7
NC_017031:1039548:1059988105998810626842697Corynebacterium pseudotuberculosis P54B96 chromosome, completehypothetical protein8e-1686.7
NC_016932:1041306:1051781105178110544772697Corynebacterium pseudotuberculosis 316 chromosome, complete genomehypothetical protein7e-1686.7
NC_017317:1143378:1151723115172311544042682Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein2e-1585.5
NC_015683:1146913:1154573115457311572542682Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein2e-1585.1
NC_003888:7028165:7049382704938270511511770Streptomyces coelicolor A3(2), complete genomeintegral membrane lysyl-tRNA synthetase5e-1584
NC_009664:4423829:4532979453297945347151737Kineococcus radiotolerans SRS30216, complete genomeprotein of unknown function DUF4705e-1584
NC_014654:895298:9007429007429017821041Halanaerobium sp. 'sapolanicus' chromosome, complete genomeprotein of unknown function DUF4702e-1275.5
NC_011831:1693935:171057017105701711484915Chloroflexus aggregans DSM 9485, complete genomeprotein of unknown function DUF4721e-0862.8