Pre_GI: BLASTP Hits

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Query: NC_011770:4924127:4961086 Pseudomonas aeruginosa LESB58, complete genome

Start: 4961086, End: 4962105, Length: 1020

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008463:4743296:4744858474485847458771020Pseudomonas aeruginosa UCBPP-PA14, complete genometranscriptional regulator OruR2e-156551
NC_002516:891000:9057269057269067451020Pseudomonas aeruginosa PAO1, complete genometranscriptional regulator OruR2e-156551
NC_018691:4619245:4644618464461846456521035Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator, AraC family protein1e-29130
NC_014259:2948335:2949247294924729503171071Acinetobacter sp. DR1 chromosome, complete genomeAraC family transcriptional regulator1e-22107
NC_002516:2306776:2306776230677623078101035Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator6e-22105
NC_008390:2448379:2449503244950324505401038Burkholderia cepacia AMMD chromosome 1, complete sequencetranscriptional regulator, AraC family9e-22104
NC_004129:4596040:4617563461756346185851023Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family2e-21103
NC_009439:101174:121557121557122549993Pseudomonas mendocina ymp, complete genomeAraC family transcriptional regulator3e-21102
NC_010501:4989455:4998963499896350000001038Pseudomonas putida W619, complete genometranscriptional regulator, AraC family1e-20100
NC_010511:6067000:6076192607619260772861095Methylobacterium sp. 4-46 chromosome, complete genomeAraC family transcriptional regulator2e-2099.8
NC_018691:761560:7629207629207639421023Alcanivorax dieselolei B5 chromosome, complete genomePutative AraC family transcription regulator3e-1892.8
NC_018697:505915:5090685090685100901023Cycloclasticus sp. P1 chromosome, complete genomeAraC-family transcriptional regulator4e-1892.4
NC_018691:2254566:2259228225922822602921065Alcanivorax dieselolei B5 chromosome, complete genomePutative transcriptional regulator2e-1686.7
NC_010623:1961685:2021028202102820220441017Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family6e-1685.1
NC_010506:3585533:3602734360273436038131080Shewanella woodyi ATCC 51908, complete genometranscriptional regulator, AraC family2e-1583.2
NC_014323:992978:1005383100538310064171035Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein8e-1581.6
NC_007511:3371319:3372433337243333734791047Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, AraC family9e-1581.3
NC_015136:1101725:1127466112746611284941029Burkholderia sp. CCGE1001 chromosome 1, complete sequenceAraC family transcriptional regulator4e-1479.3
NC_020209:47504:7962979629806361008Pseudomonas poae RE*1-1-14, complete genomeAraC family transcriptional regulator1e-1377.4
NC_012660:5793200:5815075581507558162291155Pseudomonas fluorescens SBW25 chromosome, complete genomeputative AraC family regulatory protein2e-1377
NC_011770:4542183:4564793456479345657941002Pseudomonas aeruginosa LESB58, complete genomeputative transcriptional regulator5e-1272.4
NC_008463:4342119:4364836436483643658371002Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable transcriptional regulator2e-1170.5
NC_013510:4484000:4500552450055245016071056Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, AraC family2e-1170.5
NC_015376:3320818:3331605333160533326571053Burkholderia gladioli BSR3 chromosome chromosome 2, completeTranscriptional regulator, AraC family protein5e-1168.9
NC_011001:163813:1853691853691864151047Burkholderia cenocepacia J2315 chromosome 2, complete sequenceAraC family regulatory protein6e-1168.6
NC_009075:92210:1022481022481032521005Burkholderia pseudomallei 668 chromosome II, complete sequenceputative transcriptional regulator1e-1067.8
NC_006351:73000:8293882938839571020Burkholderia pseudomallei K96243 chromosome 2, complete sequenceregulatory protein1e-1067.8
NC_020829:1840281:1842091184209118431221032Pseudomonas denitrificans ATCC 13867, complete genomeputative regulator2e-1067
NC_008027:2648560:2664870266487026658741005Pseudomonas entomophila L48, complete genomeDNA-binding protein, AraC family8e-1064.7
NC_002516:2436304:244856824485682449545978Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator2e-0963.9
NC_014762:2428721:2451614245161424526541041Sulfuricurvum kujiense DSM 16994 chromosome, complete genometranscriptional regulator, arac family6e-0962
NC_007651:3656433:3668226366822636692451020Burkholderia thailandensis E264 chromosome I, complete sequencetranscriptional regulator, putative6e-0962
NC_011757:4293000:4333052433305243341491098Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family2e-0860.5
NC_011884:2422000:2433017243301724340331017Cyanothece sp. PCC 7425, complete genometranscriptional regulator, AraC family6e-0858.5
NC_016609:3835656:384093838409383841936999Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator7e-0858.5
NC_008061:2193000:2207475220747522085691095Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AraC family7e-0755.1
NC_012660:3179980:3185843318584331868591017Pseudomonas fluorescens SBW25 chromosome, complete genomeputative AraC family regulatory protein2e-0653.9
NC_013592:1602242:1616182161618216171921011Dickeya dadantii Ech586, complete genometranscriptional regulator, AraC family2e-0653.9
NC_014310:1822751:1837637183763718386561020Ralstonia solanacearum PSI07 megaplasmid, complete sequenceAraC family transcriptional regulator3e-0652.8
NC_008740:2905990:2905990290599029070031014Marinobacter aquaeolei VT8, complete genomehelix-turn-helix- domain containing protein, AraC type4e-0652.4
NC_014323:1:1504715047161081062Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein7e-0652
NC_003296:673790:7245307245307255491020Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTION REGULATOR PROTEIN7e-0651.6