Pre_GI: BLASTP Hits

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Query: NC_011770:2690501:2725544 Pseudomonas aeruginosa LESB58, complete genome

Start: 2725544, End: 2726101, Length: 558

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011035:541560:542831542831543349519Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative phage associated protein4e-28124
NC_002946:1020175:106320710632071063725519Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein, putative phage associated protein3e-27121
NC_002927:3716894:373800537380053738505501Bordetella bronchiseptica RB50, complete genomehypothetical protein9e-22103
NC_002927:2338549:236126123612612361761501Bordetella bronchiseptica RB50, complete genomehypothetical protein9e-22103
NC_017223:3608749:362717336271733627673501Bordetella pertussis CS chromosome, complete genomehypothetical protein3e-21101
NC_002929:3568106:358698835869883587488501Bordetella pertussis Tohama I, complete genomehypothetical protein3e-21101
NC_014313:165490:171132171132171617486Hyphomicrobium denitrificans ATCC 51888 chromosome, completePathogenesis-related transcriptional factor and ERF protein1e-1995.9
NC_009255:1369200:137403913740391374575537Burkholderia vietnamiensis G4 chromosome 2, complete sequenceHNH endonuclease4e-1994.4
NC_011770:860944:871763871763872272510Pseudomonas aeruginosa LESB58, complete genomeEndY4e-1787.4
NC_015563:3074691:308337130833713083862492Delftia sp. Cs1-4 chromosome, complete genomePathogenesis-related transcriptional factor and ERF protein8e-1786.7
NC_012808:4078459:408567340856734086149477Methylobacterium extorquens AM1, complete genomeHNH endonuclease family protein1e-1582.4
NC_011601:717072:735907735907736335429Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeendonuclease4e-1580.9
NC_013361:3112023:312237631223763122942567Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein8e-1580.1
NC_013364:2645438:264601526460152646581567Escherichia coli O111:H- str. 11128, complete genomehypothetical protein8e-1580.1
NC_013364:2898964:291234129123412912907567Escherichia coli O111:H- str. 11128, complete genomeputative endonuclease8e-1580.1
NC_010002:3509506:352002335200233520547525Delftia acidovorans SPH-1, complete genomePathogenesis-related transcriptional factor and ERF protein7e-1580.1
NC_013008:3525428:354861535486153549181567Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein2e-1478.2
NC_002695:3468873:348963034896303490196567Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-1478.2
NC_002655:3538656:355695335569533557558606Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by prophage CP-933Y3e-1478.2
NC_009255:1369200:137188513718851372367483Burkholderia vietnamiensis G4 chromosome 2, complete sequencepathogenesis-related transcriptional factor and ERF protein3e-1374.7
NC_011001:2085986:210140821014082101989582Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative phage-related endonuclease5e-1270.5
NC_017328:335160:342492342492343031540Shigella flexneri 2002017 chromosome, complete genomeHNH endonuclease1e-1169.7
NC_013282:1200993:121347112134711214031561Cronobacter turicensis, complete genomehypothetical protein4e-1064.3
NC_011601:4856717:485836248583624858871510Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeendonuclease, HNH family5e-0857.4
NC_021182:2536000:254900225490022549733732Clostridium pasteurianum BC1, complete genomeAP2 domain-containing protein2e-0755.1
NC_010002:3509506:352074335207433521243501Delftia acidovorans SPH-1, complete genomePathogenesis-related transcriptional factor and ERF protein2e-0652.4
NC_007493:1672163:168911316891131689598486Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceputative endonuclease2e-0652.4
NC_007964:328825:334182334182334670489Nitrobacter hamburgensis X14, complete genomeHNH endonuclease7e-0650.4