Pre_GI: BLASTP Hits

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Query: NC_011770:2499432:2523507 Pseudomonas aeruginosa LESB58, complete genome

Start: 2523507, End: 2525630, Length: 2124

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016902:4199133:4218912421891242210592148Escherichia coli KO11FL chromosome, complete genomeN-6 DNA methylase01029
CP002516:4199133:4218912421891242210592148Escherichia coli KO11, complete genomeN-6 DNA methylase01029
CP002185:4791811:4791811479181147939582148Escherichia coli W, complete genomeputative type I restriction-modification system methyltransferase subunit01029
NC_015565:287900:2976912976912995771887Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeN-6 DNA methylase5e-126452
NC_015519:2413323:2427845242784524297281884Tepidanaerobacter sp. Re1 chromosome, complete genomeN-6 DNA methylase3e-122439
NC_009749:937412:9476959476959500222328Francisella tularensis subsp. holarctica FTA, complete genomehypothetical protein1e-26121
NC_007880:935670:9459539459539482802328Francisella tularensis subsp. holarctica, complete genomehypothetical protein3e-26120
NC_008369:939356:9496389496389519652328Francisella tularensis subsp. holarctica OSU18, complete genometype I site-specific deoxyribonuclease3e-26120
NC_009257:963536:9687019687019699721272Francisella tularensis subsp. tularensis WY96-3418 chromosome,putative N-6 DNA methylase3e-20100
NC_016937:529459:5443145443145454801167Francisella tularensis subsp. tularensis TI0902 chromosome,type I restriction-modification system M subunit putative9e-2099.4
NC_016933:608889:6202216202216213871167Francisella tularensis TIGB03 chromosome, complete genometype I restriction-modification system M subunit putative9e-2099.4
NC_014168:2820315:2828682282868228311412460Segniliparus rotundus DSM 44985 chromosome, complete genomeN-6 DNA methylase5e-1790.1
NC_008245:529378:544433544433545410978Francisella tularensis subsp. tularensis FSC 198, complete genomehypothetical protein3e-1584.3
NC_006570:529426:544481544481545458978Francisella tularensis subsp. tularensis Schu 4, complete genomehypothetical protein3e-1584.3
NC_014366:3555425:3586641358664135887222082Gamma proteobacterium HdN1, complete genomeType I restriction-modification system, methyltransferase subunit6e-1480.1
NC_013165:2240377:2269105226910522710691965Slackia heliotrinireducens DSM 20476, complete genometype I restriction-modification system methyltransferase subunit6e-1479.7
NC_011146:3720658:3739269373926937415152247Geobacter bemidjiensis Bem, complete genomeN-6 DNA methylase5e-1377
NC_015571:2002489:2018876201887620202491374Porphyromonas gingivalis TDC60, complete genomeputative type I restriction-modification system, M subunit1e-1275.9
NC_015844:3159046:3160449316044931619121464Zobellia galactanivorans, complete genometype I restriction enzyme ZgaDI, M subunit1e-1068.9
NC_014253:142026:1682001682001702602061Methanohalobium evestigatum Z-7303 chromosome, complete genomeN-6 DNA methylase3e-1067.4
NC_015578:465814:4771904771904792082019Treponema primitia ZAS-2 chromosome, complete genomeN-6 DNA methylase5e-1067
NC_015873:63487:6348763487649351449Megasphaera elsdenii DSM 20460, complete genomeN-6 DNA methylase5e-1067
NC_019978:1066000:1069387106938710707571371Halobacteroides halobius DSM 5150, complete genometype I restriction-modification system methyltransferase subunit5e-1067
NC_014366:3555425:3584620358462035866442025Gamma proteobacterium HdN1, complete genomeType I restriction-modification system, methyltransferase subunit7e-1066.6
NC_013203:1351941:1372648137264813750382391Atopobium parvulum DSM 20469, complete genomeN-6 DNA methylase1e-0965.9
NC_010338:359940:3693083693083712811974Caulobacter sp. K31, complete genomeN-6 DNA methylase2e-0965.1
NC_014217:2760898:2782553278255327840011449Starkeya novella DSM 506 chromosome, complete genomeSite-specific DNA-methyltransferase (adenine-specific)3e-0964.3
NC_016610:2077603:2092065209206520934861422Tannerella forsythia ATCC 43037 chromosome, complete genomeN-6 DNA methylase2e-0861.6
NC_006526:1976779:1989727198972719917452019Zymomonas mobilis subsp. mobilis ZM4, complete genometype I restriction-modification enzyme M subunit4e-0860.5
NC_006350:3710641:3722117372211737247172601Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative restriction modification system methylase5e-0860.1
NC_009074:3559211:3571227357122735738272601Burkholderia pseudomallei 668 chromosome I, complete sequencetype I restriction enzyme R protein N terminus (HSDR_N)/N-6 DNA methylase6e-0860.1
NC_014972:2798670:2804556280455628066972142Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein7e-0860.1
NC_008751:1043269:1057445105744510589321488Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeN-6 DNA methylase9e-0859.3
NC_013416:1783349:1791391179139117938682478Aggregatibacter actinomycetemcomitans D11S-1, complete genomeputative N-6 DNA methylase1e-0758.9
NC_008344:554229:5652155652155668431629Nitrosomonas eutropha C91, complete genomeN-6 DNA methylase2e-0758.5
NC_007925:4060635:4065251406525140667201470Rhodopseudomonas palustris BisB18, complete genomeN-6 DNA methylase2e-0758.5
NC_016147:1961000:1972377197237719738641488Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeN-6 DNA methylase3e-0757.8
NC_010831:173499:1827671827671850942328Chlorobium phaeobacteroides BS1, complete genomeN-6 DNA methylase3e-0757.8
NC_010995:764567:7750317750317765031473Cellvibrio japonicus Ueda107, complete genometype I restriction-modification system, M subunit3e-0757.8
NC_008595:5168941:5178332517833251798191488Mycobacterium avium 104, complete genometype I restriction-modification system, M subunit4e-0757.4
NC_015953:3227000:3237201323720132387241524Streptomyces sp. SirexAA-E chromosome, complete genomeN-6 DNA methylase5e-0757
NC_018876:2189798:2216770221677022182841515Methanolobus psychrophilus R15 chromosome, complete genomeN-6 DNA methylase7e-0756.6
NC_009720:1248866:1264446126444612659061461Xanthobacter autotrophicus Py2, complete genomeN-6 DNA methylase7e-0756.2
NC_015703:3880903:3902668390266839041281461Runella slithyformis DSM 19594 chromosome, complete genomeN-6 DNA methylase8e-0756.2
NC_011071:1178423:1188134118813411897171584Stenotrophomonas maltophilia R551-3, complete genomeN-6 DNA methylase9e-0756.2
NC_013959:1059004:1067359106735910698062448Sideroxydans lithotrophicus ES-1 chromosome, complete genomerestriction modification system DNA specificity domain protein1e-0655.8
NC_009720:870194:8778328778328799642133Xanthobacter autotrophicus Py2, complete genomeN-6 DNA methylase2e-0655.5
NC_007759:2097734:2113299211329921148461548Syntrophus aciditrophicus SB, complete genometype I restriction-modification system methylation subunit2e-0655.5
NC_012914:5446366:5453409545340954548931485Paenibacillus sp. JDR-2, complete genomeN-6 DNA methylase2e-0655.1
NC_016027:1902854:1924814192481419262711458Gluconacetobacter xylinus NBRC 3288, complete genometype I DNA methyltransferase M subunit2e-0654.7
NC_015711:8852850:8863000886300088644391440Myxococcus fulvus HW-1 chromosome, complete genometype I restriction enzyme StySPI M protein3e-0654.3
NC_017177:192933:194771194771195619849Clostridium difficile BI1, complete genomeN-6 DNA methylase5e-0653.5
NC_009434:695582:7187087187087202551548Pseudomonas stutzeri A1501, complete genometype I restriction-modification system, M subunit6e-0653.5
NC_013959:2449315:2463818246381824658872070Sideroxydans lithotrophicus ES-1 chromosome, complete genomeN-6 DNA methylase7e-0653.1