Pre_GI: BLASTP Hits

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Query: NC_011601:4096427:4103271 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 4103271, End: 4103891, Length: 621

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013941:4470932:447674944767494477513765Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeespF3e-69261
NC_013008:4643825:464840246484024649148747Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III effector3e-69261
NC_002695:4584177:458925745892574590003747Escherichia coli O157:H7 str. Sakai, complete genomeEspF3e-69261
NC_002655:4653160:465824046582404658986747Escherichia coli O157:H7 EDL933, complete genomeespF3e-69261
NC_013364:3701895:372061137206113721399789Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector EspF3e-65247
AP010958:3669500:367887136788713679755885Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector EspF3e-53207
NC_013353:3669500:367887136788713679755885Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector EspF3e-53207
NC_013361:5319497:536404553640455364668624Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector EspF4e-52204
NC_013716:3109700:314688131468813147786906Citrobacter rodentium ICC168, complete genomeT3SS effector protein EspF7e-49193
NC_011353:4688000:469236146923614692798438Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprotein EspF1e-33142
NC_002655:2730659:2744768274476827459221155Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933U9e-0753.5
NC_013008:2561586:2576142257614225771551014Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeTir-cytoskeleton coupling protein (TccP)7e-0650.8
NC_002695:2655445:2669551266955126705641014Escherichia coli O157:H7 str. Sakai, complete genomeEspF-like protein7e-0650.8