Pre_GI: BLASTP Hits

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Query: NC_011601:3951324:3973360 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 3973360, End: 3973650, Length: 291

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008258:3581583:360063636006363600926291Shigella flexneri 5 str. 8401, complete genomehypothetical protein7e-50195
NC_006905:3780000:378664137866413786931291Salmonella enterica subsp. enterica serovar Choleraesuis strputative transcriptional regulator1e-38157
NC_012214:3931824:395304639530463953339294Erwinia pyrifoliae Ep1/96, complete genomePutative HTH-type transcriptional regulator6e-23105
NC_013717:5726:270582705827339282Citrobacter rodentium ICC168 plasmid pCROD1, complete sequenceputative DNA binding protein7e-0752.8