Pre_GI: BLASTP Hits

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Query: NC_011601:1077548:1089018 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 1089018, End: 1090046, Length: 1029

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:3789696:3809074380907438101141041Salmonella enterica subsp. enterica serovar Paratyphi A strTMAO reductase system periplasmic protein TorT1e-123443
NC_006511:3794017:3813395381339538144351041Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCSolute binding receptor protein1e-123443
NC_015761:3698520:3717575371757537186151041Salmonella bongori NCTC 12419, complete genomeSolute binding receptor protein1e-123443
NC_011083:4020000:4039539403953940405791041Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,tmao reductase system periplasmic protein tort1e-123443
NC_011080:3976441:3995915399591539969551041Salmonella enterica subsp. enterica serovar Newport str. SL254,tmao reductase system periplasmic protein tort1e-123443
NC_011094:3887648:3907122390712239081621041Salmonella enterica subsp. enterica serovar Schwarzengrund strTMAO reductase system periplasmic protein TorT1e-123442
NC_011205:4038884:4058378405837840594181041Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853TMAO reductase system periplasmic protein TorT3e-123441
NC_011149:3930358:3949824394982439508641041Salmonella enterica subsp. enterica serovar Agona str. SL483,tmao reductase system periplasmic protein tort7e-123440
NC_011294:3880500:3899988389998839010281041Salmonella enterica subsp. enterica serovar Enteritidis strTMAO reductase system periplasmic protein TorT2e-122439
NC_010102:3955479:3974224397422439752641041Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-122439
NC_003197:4005857:4025332402533240263721041Salmonella typhimurium LT2, complete genomeperiplasmic sensor3e-122438
NC_016810:4027170:4046645404664540476851041Salmonella enterica subsp. enterica serovar Typhimurium strSolute binding receptor protein3e-122438
NC_016856:4019549:4039024403902440400641041Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Speriplasmic sensory protein associated with the TorRS two-component regulatory system3e-122438
NC_016857:4025767:4046646404664640476861041Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74periplasmic sensory protein associated with the TorRS two-component regulatory system3e-122438
NC_016860:4110968:4130443413044341314831041Salmonella enterica subsp. enterica serovar Typhimurium strTMAO reductase system periplasmic protein TorT3e-122438
NC_016863:3967156:3986631398663139876711041Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1TMAO reductase system periplasmic protein TorT3e-122438
NC_012779:305969:3059693059693070031035Edwardsiella ictaluri 93-146, complete genometmao reductase system periplasmic protein tort, putative2e-113408
NC_016831:3779611:378242537824253783357933Salmonella enterica subsp. enterica serovar Gallinarum/pullorum7e-102370
NC_017046:4025998:404579940457994046521723Salmonella enterica subsp. enterica serovar Typhimurium str. 798Solute binding receptor protein7e-79294
NC_011894:3319856:3346379334637933474491071Methylobacterium nodulans ORS 2060, complete genomeperiplasmic binding protein/LacI transcriptional regulator1e-49197
NC_011662:2320100:2320100232010023211731074Thauera sp. MZ1T, complete genomeperiplasmic binding protein/LacI transcriptional regulator1e-47190
NC_009952:2381601:240851724085172409482966Dinoroseobacter shibae DFL 12, complete genomeperiplasmic binding protein2e-38160
NC_017046:4025998:404547340454734045784312Salmonella enterica subsp. enterica serovar Typhimurium str. 798Solute binding receptor protein1e-36154
NC_013205:2332174:233878923387892339754966Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,periplasmic binding protein/LacI transcriptional regulator6e-0962
NC_014364:3238374:324759232475923248554963Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeperiplasmic binding protein/LacI transcriptional regulator6e-0858.5
NC_010556:2328303:234419623441962345110915Exiguobacterium sibiricum 255-15, complete genomeperiplasmic binding protein/LacI transcriptional regulator4e-0756.2
NC_018665:2163713:218209821820982183012915Exiguobacterium antarcticum B7 chromosome, complete genomePeriplasmic binding protein/LacI transcriptional regulator1e-0654.7
NC_013721:1581370:159778915977891598727939Gardnerella vaginalis 409-05, complete genomeperiplasmic binding protein and sugar binding domain of the LacI family protein1e-0654.3
NC_021066:601029:6076556076556086951041Raoultella ornithinolytica B6, complete genomeribose-binding periplasmic protein RbsB2e-0653.5
NC_010939:1920781:192330219233021924174873Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeD-ribose-binding periplasmic protein precursor2e-0653.5
NC_009053:1895485:189800218980021898874873Actinobacillus pleuropneumoniae L20, complete genomeD-ribose-binding periplasmic protein precursor6e-0652