Pre_GI: BLASTP Hits

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Query: NC_011369:1135592:1153285 Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete

Start: 1153285, End: 1153776, Length: 492

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrogen-fixing plant symbiont. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of American and African origin used in farming, and is therefore one of the most important clover inoculants but is incompatible with Mediterranean perennial clovers, such as those nodulated by the dissimilar strain WSM1325. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014834:3130715:317406731740673174555489Rhodopseudomonas palustris DX-1 chromosome, complete genomehypothetical protein5e-1993.6
NC_002927:2338549:234829623482962348745450Bordetella bronchiseptica RB50, complete genomehypothetical protein9e-1785.9
NC_015590:1398157:1410020141002014112041185Sinorhizobium meliloti AK83 chromosome 1, complete sequencehypothetical protein1e-1582
NC_010612:4837346:484384048438404844403564Mycobacterium marinum M, complete genomehypothetical protein2e-1478.6
NC_011369:1135592:118125611812561181744489Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completehypothetical protein5e-1373.6
NC_003295:3421520:345738334573833457865483Ralstonia solanacearum GMI1000, complete genomePROBABLE BACTERIOPHAGE T7-RELATED GENE PROTEIN8e-1372.8
NC_011601:717072:726029726029726496468Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-1169.3
NC_011601:2614691:262543726254372625904468Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-1169.3
NC_010572:82000:1313941313941325511158Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein4e-0960.5
NC_010572:8408500:8413379841337984145361158Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein4e-0960.5
NC_011369:1135592:115024011502401150776537Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completehypothetical protein5e-0960.5