Pre_GI: BLASTP Hits

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Query: NC_011368:678291:689554 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201,

Start: 689554, End: 689748, Length: 195

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrogen-fixing plant symbiont. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of American and African origin used in farming, and is therefore one of the most important clover inoculants but is incompatible with Mediterranean perennial clovers, such as those nodulated by the dissimilar strain WSM1325. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:1898648:190461119046111904805195Bradyrhizobium japonicum USDA 110, complete genomeferredoxin8e-1889
NC_011894:4066926:408276840827684082974207Methylobacterium nodulans ORS 2060, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein7e-1785.9
NC_017249:8283701:833089983308998331189291Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-1167.8
NC_004463:1898648:192336919233691923593225Bradyrhizobium japonicum USDA 110, complete genomeferredoxin-like protein3e-1167.4
NC_010627:532407:547029547029547223195Burkholderia phymatum STM815 plasmid pBPHY02, complete sequence4Fe-4S ferredoxin, iron-sulfur binding domain protein1e-1065.1
NC_010084:534937:558753558753559016264Burkholderia multivorans ATCC 17616 chromosome 1, complete4Fe-4S ferredoxin2e-1064.3
NC_010804:2960352:296575729657572966020264Burkholderia multivorans ATCC 17616 chromosome 1, completeputative ferredoxin2e-1064.3
NC_010529:296500:330763330763330954192Cupriavidus taiwanensis plasmid pRALTA, complete sequenceFdxN ferredoxin1e-0962
NC_008309:190550:196692196692196952261Haemophilus somnus 129PT, complete genomeferredoxin1e-0858.5
NC_010519:71365:763667636676626261Haemophilus somnus 2336 chromosome, complete genome4Fe-4S ferredoxin1e-0858.2
NC_012880:3241886:325090032509003251160261Dickeya dadantii Ech703, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein2e-0857.8
NC_008786:142797:155228155228155485258Verminephrobacter eiseniae EF01-2, complete genome4Fe-4S ferredoxin, iron-sulfur binding domain protein7e-0855.8
NC_012912:1229333:123583512358351236098264Dickeya zeae Ech1591, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein2e-0754.3
NC_010546:553774:562813562813563175363Cyanothece sp. ATCC 51142 chromosome circular, complete sequence4Fe-4S ferredoxin2e-0754.3
NC_014314:1148000:115283211528321153095264Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein3e-0753.9
NC_013799:1012884:102748010274801027698219Hydrogenobacter thermophilus TK-6, complete genome4Fe-4S ferredoxin3e-0753.9
NC_017161:1012874:102747010274701027688219Hydrogenobacter thermophilus TK-6 chromosome, complete genome4Fe-4S ferredoxin3e-0753.9
NC_007404:387827:408901408901409152252Thiobacillus denitrificans ATCC 25259, complete genomeprobable ferredoxin protein7e-0752.8
NC_004917:946550:962357962357962608252Helicobacter hepaticus ATCC 51449, complete genomeferredoxin9e-0752.4
NC_017512:2116295:212999521299952130246252Neisseria meningitidis WUE 2594, complete genomeputative ferredoxin2e-0651.6
NC_013016:2041890:205559320555932055844252Neisseria meningitidis alpha14 chromosome, complete genomeputative ferredoxin1e-0651.6
NC_017501:121902:129938129938130189252Neisseria meningitidis 8013, complete genomeputative ferredoxin1e-0651.6
NC_017513:115870:123907123907124158252Neisseria meningitidis G2136 chromosome, complete genomeiron-sulfur cluster-binding protein1e-0651.6
NC_017516:123618:131660131660131911252Neisseria meningitidis H44/76 chromosome, complete genomeiron-sulfur cluster-binding protein1e-0651.6
NC_010120:2055803:206950720695072069758252Neisseria meningitidis 053442, complete genomeferredoxin, 4Fe-4S bacterial type1e-0651.6
NC_008344:2465042:246696524669652467234270Nitrosomonas eutropha C91, complete genome4Fe-4S ferredoxin, iron-sulfur binding domain protein2e-0651.2
NC_013941:3182576:320259432025943202854261Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein5e-0650.1
NC_017046:2717810:271877427187742719034261Salmonella enterica subsp. enterica serovar Typhimurium str. 798ferredoxin9e-0648.9
NC_016860:2716152:271711627171162717376261Salmonella enterica subsp. enterica serovar Typhimurium strputative ferredoxin9e-0648.9
NC_003197:2720726:272169027216902721950261Salmonella typhimurium LT2, complete genomeputative ferredoxin9e-0648.9