Pre_GI: BLASTP Hits

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Query: NC_011205:944125:958593 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 958593, End: 958766, Length: 174

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:920346:934291934291934971681Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative dehydrogenase2e-2097.8
NC_016860:959609:973554973554974234681Salmonella enterica subsp. enterica serovar Typhimurium strputative dehydrogenase2e-2097.8
NC_016856:921057:935002935002935682681Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-2097.8
NC_016810:919266:933211933211933891681Salmonella enterica subsp. enterica serovar Typhimurium strputative dehydrogenase2e-2097.8
NC_016857:919266:933364933364933891528Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74glucose sorbosone dehydrogenase3e-2097.1
NC_010102:2178594:218369121836912184371681Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-1994.7
NC_017046:919249:933265933265933873609Salmonella enterica subsp. enterica serovar Typhimurium str. 798dehydrogenase2e-1994.4
NC_006905:946418:961697961697962377681Salmonella enterica subsp. enterica serovar Choleraesuis strputative dehydrogenase2e-1994.4
NC_011094:973140:987080987080987760681Salmonella enterica subsp. enterica serovar Schwarzengrund strdehydrogenase2e-1994
NC_012947:2898179:2918609291860929197241116Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeglucose sorbosone dehydrogenase6e-1579.7
NC_016612:3314846:3316954331695433180691116Klebsiella oxytoca KCTC 1686 chromosome, complete genomeglucose sorbosone dehydrogenase8e-1579.3
NC_015224:3587500:3613266361326636144291164Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein3e-1167
NC_012917:1923059:1938153193815319393191167Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeglucose sorbosone dehydrogenase3e-0960.5
NC_013173:1231213:1248835124883512499831149Desulfomicrobium baculatum DSM 4028, complete genomeglucose sorbosone dehydrogenase7e-0856.2