Pre_GI: BLASTP Hits

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Query: NC_011205:609464:631775 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 631775, End: 632647, Length: 873

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012759:4132527:414666441466644147554891Escherichia coli BW2952 chromosome, complete genomeNin-like protein3e-163574
NC_006905:368942:388012388012388884873Salmonella enterica subsp. enterica serovar Choleraesuis strNin-like protein5e-163573
NC_013353:2911741:291495229149522915830879Escherichia coli O103:H2 str. 12009, complete genomeNin-like protein9e-148522
AP010958:2911741:291495229149522915830879Escherichia coli O103:H2 str. 12009 DNA, complete genomeNin-like protein9e-148522
NC_013361:3651150:365328936532893654167879Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein5e-146516
NC_011750:5045927:505556150555615056439879Escherichia coli IAI39 chromosome, complete genomeputative phosphoadenosine phosphosulfate reductase from phage origin6e-142503
NC_013282:1200993:120867112086711209540870Cronobacter turicensis, complete genomeUncharacterized nin region protein ORF2907e-87320
NC_014738:2094000:213017721301772130989813Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,hypothetical protein4e-2099
NC_017045:119046:135426135426136238813Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,hypothetical protein4e-2099
NC_008571:2582674:258267425826742583588915Gramella forsetii KT0803, complete genomehypothetical protein5e-1685.1
NC_010170:1498253:151825515182551519097843Bordetella petrii, complete genomehypothetical protein5e-1375.5
NC_002488:1638946:167942216794221680264843Xylella fastidiosa 9a5c, complete genomehypothetical protein1e-1273.9
NC_013421:1780722:179119017911901792032843Pectobacterium wasabiae WPP163, complete genomehypothetical protein2e-1273.2
NC_015573:569625:581582581582582421840Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomephosphoadenosine phosphosulfate reductase6e-1065.1
NC_009089:1093832:110518211051821105907726Clostridium difficile 630, complete genomephage protein2e-0757
NC_009089:1093832:10873831087383114439857016Clostridium difficile 630, complete genome2e-0757