Pre_GI: BLASTP Hits

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Query: NC_011205:609464:621303 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 621303, End: 621884, Length: 582

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:593100:604550604550605047498Salmonella enterica subsp. enterica serovar Schwarzengrund strEae protein6e-80296
NC_009436:2776410:282133828213382821901564Enterobacter sp. 638, complete genomehypothetical protein5e-40163
NC_010067:2529750:259384825938482594354507Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-40163
NC_009778:959982:973435973435974175741Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein5e-35147
NC_016860:364981:371911371911372420510Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-30130
NC_013361:1558423:156453915645391565168630Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein8e-2096.7
NC_013361:3287671:330093633009363301523588Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein4e-1374.7
NC_011601:1039500:104623110462311046794564Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-1273.2
NC_007946:2625461:263531026353102635846537Escherichia coli UTI89, complete genomehypothetical protein1e-1272.8
NC_006905:368942:377324377324377701378Salmonella enterica subsp. enterica serovar Choleraesuis strEae protein3e-1271.6
NC_012125:1330066:133867513386751339076402Salmonella enterica subsp. enterica serovar Paratyphi C straingp437e-1270.5
NC_008258:269806:281566281566281922357Shigella flexneri 5 str. 8401, complete genomeputative bacteriophage protein1e-1066.2