Pre_GI: BLASTP Hits

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Query: NC_011205:329155:342075 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 342075, End: 342215, Length: 141

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:2667561:268565926856592685823165Salmonella enterica subsp. enterica serovar Gallinarum/pullorumrhs core protein with extension7e-1992.8
NC_011080:333121:342275342275342415141Salmonella enterica subsp. enterica serovar Newport str. SL254,rhs core protein with extension1e-1892
NC_011149:309556:319817319817319957141Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-1582
NC_012125:326909:332957332957333097141Salmonella enterica subsp. enterica serovar Paratyphi C strainrhs core protein with extension1e-1581.6
NC_016822:1839739:1855406185540618588223417Shigella sonnei 53G, complete genomerhs core protein with extension6e-0959.7
NC_007384:1763375:1776639177663917799083270Shigella sonnei Ss046, complete genomerhs core protein with extension9e-0958.9