Pre_GI: BLASTP Hits

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Query: NC_011205:2462025:2465061 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 2465061, End: 2465345, Length: 285

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011080:2342672:234570623457062346548843Salmonella enterica subsp. enterica serovar Newport str. SL254,side tail fiber protein5e-53206
NC_006905:2355290:235820423582042358995792Salmonella enterica subsp. enterica serovar Choleraesuis strputative tail fiber protein of phage9e-53205
NC_012125:1517925:153561915356191536410792Salmonella enterica subsp. enterica serovar Paratyphi C straintail fiber protein of phage9e-53205
NC_016810:2325190:234163623416362342463828Salmonella enterica subsp. enterica serovar Typhimurium str3e-52203
NC_010102:683444:701098701098701889792Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-52202
NC_003197:2327474:234392023439202344711792Salmonella typhimurium LT2, complete genomeputative tail fiber protein of phage4e-52202
NC_016832:687000:703004703004703795792Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Side tail fiber protein4e-52202
NC_016856:2379027:239547323954732396264792Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative tail fiber protein of phage4e-52202
NC_016857:2325190:234163623416362342427792Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74side tail fiber protein4e-52202
NC_016860:2323017:233946323394632340254792Salmonella enterica subsp. enterica serovar Typhimurium strside tail fiber protein4e-52202
NC_016863:2324293:234366523436652344456792Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative tail fiber protein of phage4e-52202
NC_017046:2324554:234100023410002341791792Salmonella enterica subsp. enterica serovar Typhimurium str. 7984e-52202
NC_011083:2375061:239150023915002392291792Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,4e-52202