Pre_GI: BLASTP Hits

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Query: NC_011205:2024458:2039112 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 2039112, End: 2039318, Length: 207

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:1083871:109069310906931090899207Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-22103
NC_011083:1323827:133270413327041332910207Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3e-22103
NC_011149:1870931:188559618855961885802207Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-21100
NC_010102:1779707:179435917943591794586228Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-2199.4
NC_012125:2531817:254647125464712546686216Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-1995.1
NC_006905:1342474:135928613592861359501216Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein1e-1995.1
NC_016863:1277652:128582912858291286032204Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein1e-1994.7
NC_016860:1317174:132535113253511325554204Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-1994.7
NC_011080:1321268:132945213294521329583132Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-0857