Pre_GI: BLASTP Hits

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Query: NC_011205:1345511:1353376 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 1353376, End: 1353561, Length: 186

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011415:1472500:147695914769591477240282Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-1374.7
NC_016902:2580774:260355926035592603780222Escherichia coli KO11FL chromosome, complete genomehypothetical protein2e-1374.7
CP002516:2580774:260355926035592603780222Escherichia coli KO11, complete genomeprotein of unknown function DUF11872e-1374.7
NC_000913:1404000:141155514115551411764210Escherichia coli K12, complete genomeRac prophage; predicted protein4e-1373.6
AC_000091:1407693:141524514152451415454210Escherichia coli W3110 DNA, complete genomehypothetical protein4e-1373.6
CP002185:1493280:150207015020701502279210Escherichia coli W, complete genomeRac prophage; predicted protein4e-1373.6
NC_010473:1493983:150095115009511501160210Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; predicted protein4e-1373.6
NC_012759:1296000:130361413036141303823210Escherichia coli BW2952 chromosome, complete genomehypothetical protein4e-1373.6
NC_012947:2366000:238347423834742383683210Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein4e-1373.6
NC_012967:1403733:141070114107011410910210Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein4e-1373.6
NC_003198:1908238:193194019319401932128189Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-1373.2