Pre_GI: BLASTP Hits

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Query: NC_011149:3187022:3199209 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 3199209, End: 3199595, Length: 387

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:3100683:311309131130913113297207Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-2199.8
NC_011147:3075186:308760530876053087811207Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-2199.8
NC_006511:3079512:309193130919313092137207Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible membrane protein5e-2199.8
NC_003198:3126548:313895631389563139162207Salmonella enterica subsp. enterica serovar Typhi str. CT18,possible membrane protein5e-2199.8
NC_004631:3112043:312445131244513124657207Salmonella enterica subsp. enterica serovar Typhi Ty2, completepossible membrane protein5e-2199.8