Pre_GI: BLASTP Hits

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Query: NC_011149:1236689:1241176 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1241176, End: 1241370, Length: 195

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:1090274:110275811027581102952195Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-29125
NC_016856:1957263:196696019669601967154195Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein8e-29125
NC_012125:1897611:192106019210601921254195Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein8e-29125
NC_011205:1391971:141197214119721412166195Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein8e-29125
NC_011083:1993672:200336220033622003556195Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein8e-29125
NC_006905:1961774:197148819714881971682195Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein8e-29125
NC_011094:1923870:193356519335651933765201Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-28124
NC_011080:1944226:196057219605721960766195Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein2e-28124
NC_016831:1690811:170049117004911700685195Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein7e-28122