Pre_GI: BLASTP Hits

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Query: NC_011094:842038:859488 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 859488, End: 859625, Length: 138

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010102:2322866:233019623301962330348153Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-2096.3
NC_003197:776238:793739793739793876138Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein7e-2095.9
NC_016810:775649:793150793150793287138Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein7e-2095.9
NC_016856:776735:794236794236794373138Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein7e-2095.9
NC_016857:775649:793150793150793287138Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein7e-2095.9
NC_016860:816000:832569832569832706138Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein7e-2095.9
NC_016863:776734:794235794235794372138Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein7e-2095.9
NC_017046:775636:793136793136793273138Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein7e-2095.9
NC_011083:824659:842148842148842285138Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein1e-1995.1
NC_006511:2090058:209667020966702096807138Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-1995.1
NC_011147:2085241:209185320918532091990138Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-1995.1
NC_016832:2201860:220919022091902209342153Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-1994.7
NC_003198:751779:768519768519768671153Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-1994.7
NC_004631:2205821:221241822124182212570153Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-1994.7
NC_011080:780850:798350798350798487138Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein4e-1993.6