Pre_GI: BLASTP Hits

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Query: NC_011094:842038:856742 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 856742, End: 857467, Length: 726

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:751779:766138766138766971834Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-112404
NC_004631:2205821:221411822141182214951834Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-112404
NC_011147:2085241:209401120940112094844834Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-111402
NC_006511:2090058:209882820988282099661834Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-111402
NC_011080:780850:795553795553796329777Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein1e-111402
NC_003197:776238:790885790885791718834Salmonella typhimurium LT2, complete genomeputative glycosyltransferase2e-111401
NC_016810:775649:790296790296791129834Salmonella enterica subsp. enterica serovar Typhimurium strputative glycosyltransferase, cell wall biogenesis2e-111401
NC_016857:775649:790296790296791129834Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative glycosyltransferase2e-111401
NC_016860:816000:829715829715830548834Salmonella enterica subsp. enterica serovar Typhimurium strputative glycosyl transferase2e-111401
NC_016863:776734:791381791381792214834Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative glycosyltransferase2e-111401
NC_017046:775636:790339790339791115777Salmonella enterica subsp. enterica serovar Typhimurium str. 798glycosyltransferase, cell wall biogenesis4e-111400
NC_016856:776735:791382791382792215834Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative glycosyltransferase1e-110399
NC_016832:2201860:221089022108902211657768Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-110396
NC_010102:2322866:233236923323692333136768Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-109394
NC_011083:824659:839360839360840127768Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative glycosyltransferase3e-108391