Pre_GI: BLASTP Hits

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Query: NC_011094:4442478:4454804 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 4454804, End: 4455094, Length: 291

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008253:296500:310576310576310905330Escherichia coli 536, complete genomemajor pilu subunit operon regulatory protein PapB1e-1891.7
NC_004431:1166568:118751211875121187841330Escherichia coli CFT073, complete genomePutative F1C and S fimbrial switch Regulatory protein1e-1891.7
NC_008253:4735418:475429947542994754613315Escherichia coli 536, complete genomemajor pilu subunit operon regulatory protein PapB7e-1785.9
NC_013508:1351447:136562613656261365925300Edwardsiella tarda EIB202, complete genomehypothetical protein3e-1684
NC_011751:3453683:346180434618043462118315Escherichia coli UMN026 chromosome, complete genomepap operon regulatory protein PapB2e-1684
NC_007946:4779745:479723847972384797552315Escherichia coli UTI89, complete genomepap operon regulatory protein PapB2e-1684
NC_011750:4775770:478534547853454785659315Escherichia coli IAI39 chromosome, complete genomepap operon regulatory protein PapB2e-1684
NC_011080:4543000:455555645555564555861306Salmonella enterica subsp. enterica serovar Newport str. SL254,repressor protein5e-1476.3
NC_007941:11319:415094150941781273Escherichia coli UTI89 plasmid pUTI89, complete sequencehypothetical protein1e-0962
NC_013508:2356865:236579523657952366097303Edwardsiella tarda EIB202, complete genomemajor pilu subunit operon regulatory protein PapB6e-0959.7
NC_013717:5726:135941359413917324Citrobacter rodentium ICC168 plasmid pCROD1, complete sequenceputative fimbrial regulatory protein4e-0753.5