Pre_GI: BLASTP Hits

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Query: NC_011094:1584038:1601826 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1601826, End: 1603277, Length: 1452

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:1578451:1578451157845115799021452Salmonella enterica subsp. enterica serovar Agona str. SL483,Na+/H+ antiporter NhaC0847
NC_016863:1575488:1591450159145015929011452Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative Na+/H+ antiporter0842
NC_016860:1614280:1630971163097116324221452Salmonella enterica subsp. enterica serovar Typhimurium strNa+/H+ antiporter NhaC0842
NC_016857:1576636:1590134159013415915851452Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative Na+/H+ antiporter0840
NC_016810:1576636:1590134159013415915851452Salmonella enterica subsp. enterica serovar Typhimurium strputative Na+/H+ antiporter0840
NC_017046:1574057:1590084159008415914691386Salmonella enterica subsp. enterica serovar Typhimurium str. 798Na+/H+ antiporter0809
NC_014966:1668822:1684768168476816862431476Vibrio vulnificus MO6-24/O chromosome II, complete sequenceNa+/H+ antiporter NhaC2e-160566
NC_008309:842072:8625008625008639091410Haemophilus somnus 129PT, complete genomeNa(+)/H(+) antiporter2e-120433
NC_007946:4875997:4882183488218348836341452Escherichia coli UTI89, complete genomeputative Na+/H+ antiporter3e-112405
NC_018720:47984:5546255462569431482Bifidobacterium asteroides PRL2011 chromosome, complete genometransporter, probably Na+:H+ antiporter / Malate + H+: lactate + Na+ antiporter, MleN1e-100367
NC_003198:1463253:146658214665821467202621Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transport protein (pseudogene)2e-92340
NC_008253:4817864:4820674482067448219121239Escherichia coli 536, complete genomeputative Na+/H+ antiporter5e-78291
NC_014614:2500301:2518175251817525196051431Clostridium sticklandii, complete genomeNa+/H+ antiporter NhaC2e-73276
NC_009922:315870:3231243231243245541431Alkaliphilus oremlandii OhILAs, complete genomeNa+/H+ antiporter NhaC6e-72271
NC_014618:1103239:1121293112129311227321440Enterobacter cloacae SCF1 chromosome, complete genomeNa+/H+ antiporter NhaC6e-71268
NC_018604:1534074:1535271153527115367011431Brachyspira pilosicoli WesB complete genomeputative Na+/H+ antiporter3e-67256
NC_010498:4967724:4980928498092849823311404Escherichia coli SMS-3-5, complete genomeNa+/H+ antiporter IbeT5e-66252
NC_012673:77610:9306593065944921428Exiguobacterium sp. AT1b, complete genomeNa+/H+ antiporter NhaC3e-63243
NC_009633:3522933:3535536353553635369361401Alkaliphilus metalliredigens QYMF chromosome, complete genomeNa+/H+ antiporter NhaC4e-63242
NC_007963:1582089:1600093160009316016011509Chromohalobacter salexigens DSM 3043, complete genomeNa+/H+ antiporter NhaC9e-63241
NC_003910:2588000:2592360259236025938681509Colwellia psychrerythraea 34H, complete genomeNa+/H+ antiporter NhaC7e-61234
NC_003454:2080705:2087095208709520885161422Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeNA+/H+ antiporter NHAC4e-60232
NC_011963:1482042:1486529148652914880191491Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceNa+/H+ antiporter NhaC6e-58225
NC_016745:546249:5516415516415531041464Oceanimonas sp. GK1 chromosome, complete genomeNa+/H+ antiporter NhaC9e-56218
NC_015731:1381737:1384891138489113863151425Nitrosomonas sp. Is79A3 chromosome, complete genomeNa+/H+ antiporter NhaC5e-53209
NC_008344:554229:5670505670505684771428Nitrosomonas eutropha C91, complete genomeNa+/H+ antiporter NhaC1e-50201
NC_010718:2860096:2878515287851528799391425Natranaerobius thermophilus JW/NM-WN-LF, complete genomeNa+/H+ antiporter NhaC2e-50200
NC_014727:1736500:1736727173672717381061380Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,na(+)/h(+) antiporter2e-49197
NC_003454:983681:9836819836819850601380Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeNA+/H+ antiporter NHAC8e-49195
NC_004663:163152:1631521631521645791428Bacteroides thetaiotaomicron VPI-5482, complete genomeNa(+)/H(+) antiporter3e-48193
NC_013165:1407000:1441246144124614426731428Slackia heliotrinireducens DSM 20476, complete genomeNa+ antiporter NhaC1e-47191
NC_009524:263587:2661072661072675911485Psychrobacter sp. PRwf-1 chromosome, complete genomeNa+/H+ antiporter NhaC1e-44181
NC_008530:1454118:1488355148835514897311377Lactobacillus gasseri ATCC 33323, complete genomeNa+/H+ antiporter7e-45181
NC_010718:1959517:1974058197405819754861429Natranaerobius thermophilus JW/NM-WN-LF, complete genome9e-41168
NC_013895:1086500:1089204108920410905861383Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeNa+/H+ antiporter NhaC2e-40167
NC_015944:10500:2680626806282721467Haloarcula hispanica ATCC 33960 plasmid pHH400, complete sequenceNa+/H+ antiporter2e-38160
NC_006395:161455:1680691680691695351467Haloarcula marismortui ATCC 43049 plasmid pNG700, completeNa+/H+ antiporter3e-38159
NC_014632:11925:2952329523308631341Ilyobacter polytropus DSM 2926 chromosome, complete genometransporter, NhaC family9e-36151
NC_015565:1075693:1096107109610710974951389Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeNa+/H+ antiporter NhaC-like protein3e-35149
NC_010610:1649500:1649804164980416510211218Lactobacillus fermentum IFO 3956, complete genomeNa-H antiporter2e-28127
NC_008253:4817864:482377648237764824132357Escherichia coli 536, complete genomeputative Na+/H+ antiporter1e-26121
NC_014169:703889:7198207198207212021383Bifidobacterium longum subsp. longum JDM301 chromosome, completeNa+/H+ antiporter7e-1375.9