Pre_GI: BLASTP Hits

Some Help

Query: NC_011083:374000:391696 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 391696, End: 391899, Length: 204

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:364981:385479385479385682204Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-33139
NC_012125:1330066:135132913513291351502174Salmonella enterica subsp. enterica serovar Paratyphi C strainNinH6e-27119
NC_013850:1887556:190894019089401909137198Klebsiella variicola At-22 chromosome, complete genomeNinH family protein6e-1992.8
NC_013361:3287671:328893432889343289140207Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-1890.9
NC_012759:4132527:414864141486414148847207Escherichia coli BW2952 chromosome, complete genomeProtein ninH2e-1890.9
NC_011740:2072173:210345021034502103656207Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein, Protein ninH from phage origin2e-1890.9
NC_013364:3312379:333294533329453333139195Escherichia coli O111:H- str. 11128, complete genomehypothetical protein3e-1890.5
NC_017328:303987:324090324090324278189Shigella flexneri 2002017 chromosome, complete genomeGp682e-1477.4
NC_011147:2496808:250585525058552506043189Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-1477
NC_006511:2501500:251031925103192510507189Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein3e-1477
NC_009800:289000:307541307541307729189Escherichia coli HS, complete genomephage NinH protein3e-1477
NC_014306:3524980:356314135631413563347207Erwinia billingiae Eb661, complete genomephage NinH protein7e-1269.3
NC_013282:1200993:122288912228891223080192Cronobacter turicensis, complete genomeProtein ninH2e-1064.7