Pre_GI: BLASTP Hits

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Query: NC_011083:374000:390373 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 390373, End: 390705, Length: 333

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:1177946:119570411957041196087384Escherichia coli S88 chromosome, complete genomehypothetical protein8e-29125
NC_008563:1175035:119218211921821192565384Escherichia coli APEC O1, complete genomehypothetical protein8e-29125
NC_007946:1239278:125483712548371255178342Escherichia coli UTI89, complete genomehypothetical protein1e-28125
NC_004431:1401681:141830214183021418643342Escherichia coli CFT073, complete genomehypothetical protein1e-28125
NC_011147:2496808:250705625070562507397342Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-28124
NC_006511:2501500:251152025115202511861342Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-28124
NC_016860:364981:384147384147384488342Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-28123
NC_011751:1405381:142370214237021424085384Escherichia coli UMN026 chromosome, complete genomehypothetical protein3e-28123
NC_004838:51013:992659926599636372Yersinia pestis KIM plasmid pMT-1, complete sequencehypothetical protein1e-1788.6
NC_009800:289000:306098306098306457360Escherichia coli HS, complete genomeputative protein ninX1e-1582
NC_011601:2614691:261469126146912615050360Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeNinX3e-1580.1
NC_014121:3627588:366316736631673663535369Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein4e-1270.1
NC_009778:2993218:300969230096923010012321Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein5e-1269.7
NC_011740:2072173:210481821048182105237420Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein, putative protein ninX from phage origin2e-1168.2
NC_020418:3133831:314551031455103145788279Morganella morganii subsp. morganii KT, complete genomehypothetical protein5e-1063.2