Pre_GI: BLASTP Hits

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Query: NC_011083:374000:379255 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 379255, End: 379941, Length: 687

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009800:289000:293833293833294474642Escherichia coli HS, complete genomehypothetical protein3e-79294
NC_011205:609464:6195466195466206281083Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853Eaa protein1e-37155
NC_016845:1285435:130060613006061301559954Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,Eaa15e-36150
NC_017046:2756000:276381627638162764514699Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein4e-35147
NC_016856:2812905:281828528182852818983699Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SEaa14e-35147
NC_011080:2761403:276678327667832767481699Salmonella enterica subsp. enterica serovar Newport str. SL254,Eaa14e-35147
NC_009648:1541699:154475115447511545362612Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein9e-34143
NC_002655:2142587:215293221529322153093162Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933R4e-1374.7
NC_002695:1929215:193407219340721934233162Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein4e-1374.7
NC_013364:1596278:161111016111101611463354Escherichia coli O111:H- str. 11128, complete genomehypothetical protein6e-0961.2
NC_017328:303987:312617312617313291675Shigella flexneri 2002017 chromosome, complete genomeputative bacteriophage protein7e-0857.8
NC_011294:2053991:205626120562612057124864Salmonella enterica subsp. enterica serovar Enteritidis strphage protein2e-0652.8
NC_002655:1332961:133323813332381333861624Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by bacteriophage BP-933W7e-0650.8
NC_013008:3231414:324675732467573247374618Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein8e-0650.8
NC_011353:3276734:329188632918863292503618Escherichia coli O157:H7 str. EC4115 chromosome, complete genome8e-0650.8