Pre_GI: BLASTP Hits

Some Help

Query: NC_011083:338910:348325 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 348325, End: 348498, Length: 174

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:311796:317103317103317360258Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-1787.4
NC_011205:329155:341189341189341446258Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-1787.4
NC_012125:326909:332076332076332333258Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein9e-1579
NC_006905:326517:332206332206332463258Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein9e-1579
NC_013421:385930:393088393088393399312Pectobacterium wasabiae WPP163, complete genomeDomain of unknown function DUF1813 HSP20-like protein8e-1475.9
NC_011149:309556:318927318927319184258Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-1374.3
NC_011080:333121:341372341372341647276Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein2e-1167.8
NC_003197:332086:339328339328339603276Salmonella typhimurium LT2, complete genomehypothetical protein2e-1064.3
NC_016856:332771:340013340013340288276Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-1064.3
NC_016857:329849:338806338806339081276Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein2e-1064.3
NC_016863:332060:339302339302339577276Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-1064.3
NC_016860:332087:339329339329339556228Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-1064.3
NC_016831:2667561:268653726865372686671135Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-0858.2
NC_016845:4498097:452407745240774524370294Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein5e-0856.6
NC_011083:338910:346859346859347122264Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein4e-0650.1